ggKbase home page

SCNpilot_expt_1000_bf_scaffold_68268_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3..263

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 82.0
  • Bit_score: 113
  • Evalue 4.80e-23
ABC transporter-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4S2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 81.0
  • Bit_score: 129
  • Evalue 1.20e-27
ABC transporter-like protein {ECO:0000313|EMBL:EYR81933.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 81.0
  • Bit_score: 129
  • Evalue 1.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
GCTGACGGGCGGAAGCTGGCAATCGCCTTCACCACGCACCAGCCGAACCACGCGGCGGCGATTGCCGACCAGGTTCTGCTCATGCTTCCAAACACACAAACCCTGTTCGGCTCGACCGATGAGGTCATGACGGAAGCAAGCCTTGAAGCGCTCTACGGCATCCCGGTCCGCGCCGTACACCTTGGAGGTCGTGAGCAGGAGGAAACCGCCTTCGTTCCGCTGTTCCATCAACGGGCGCGCCAGGGAGATACCCATGAGTGA
PROTEIN sequence
Length: 87
ADGRKLAIAFTTHQPNHAAAIADQVLLMLPNTQTLFGSTDEVMTEASLEALYGIPVRAVHLGGREQEETAFVPLFHQRARQGDTHE*