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SCNpilot_expt_1000_bf_scaffold_68946_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 645..1079

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator of sugar metabolism n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CR75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 145.0
  • Bit_score: 290
  • Evalue 8.90e-76
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EYR79170.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 145.0
  • Bit_score: 290
  • Evalue 1.20e-75
transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 144.0
  • Bit_score: 187
  • Evalue 2.60e-45

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGATCGAGCCCGGCCAGGTGATCTTCCTCGATGGCGGCACGACGACGGCGGCGCTTGCCCGCCTGCTGCCGCGCAATTTCGCCTTCACGGTGGTGACGCACAGCCCGACGATCGCCTGCGAGCTCGAGCGCCACCCGACCGCCGAGATCGTCCTGATCGGCGGCAGGCTCTACAGACATTCGATGGTGTCGACCGGCGCCATGGCGCTGGAGGCGATACGCGGCCTGAAGGCGGATCTCTACTTCATGGGCGTGACGGCCGCGCATCCGACGCACGGCTTCACCACCGGCGACATGGAGGAAGCCGCCACCAAACGCACCATCGCCGAGAACACCGCAGCGACCTGGGTCCTGCTGACGCGGGAAAAACTCGGCTGCGCCTCGCCCTGGAAGATCCTGCCGCTCGCCGCCGCCACCGGTCTCCTCCTCCCGCCC
PROTEIN sequence
Length: 145
MIEPGQVIFLDGGTTTAALARLLPRNFAFTVVTHSPTIACELERHPTAEIVLIGGRLYRHSMVSTGAMALEAIRGLKADLYFMGVTAAHPTHGFTTGDMEEAATKRTIAENTAATWVLLTREKLGCASPWKILPLAAATGLLLPP