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SCNpilot_expt_1000_bf_scaffold_64448_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(589..1128)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXY0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 361
  • Evalue 3.90e-97
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 361
  • Evalue 5.50e-97
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 167.0
  • Bit_score: 270
  • Evalue 4.90e-70

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
CTGCGCGCTGGGCGGCTGATGGAGACGGCGACCGCTGTCTACGGCGTGCAGGCCATGGCGGCGCTGCTGCGCTTCCTGCCAGAGCGCGACCCGCATCCCCATCTCTACGAGGCGCTTTCCGTCATCCTCGATCACCTGCACGAGCCGGCCGATGCCGGCGAACTCTTCGTGCGCTTCGAACTCGCCGTGCTCAACGATCTCGGCTTCGGCCTCGATCTTTTCGAATGTGTCGCAACGGGCAGCCGCGAAAACCTCTGTTACGTGTCGCCGAAATCCGGCCGTGCCGTTTCGCGCGAAGCCGGCGCACCCTGGGCGGACAAGATGCTGGCACTGCCGGCCTTTCTTGGCGACGAGCGCCGGCACGCCGCCGATGCTGCCGCCCTCGCGGACGGCTTCCGGCTGACCGCCTTCTTCCTCAACCGGCATGTCTGCGAACCGCGCGGGCTGGAACTCGCCAGCGCCCGCGACGGCTTCATCCAGGCGGCCCTGAAGGCGCTCGGCACGCCGAGGCACGATCAACCCCGAGAGGCGCATGCATGA
PROTEIN sequence
Length: 180
LRAGRLMETATAVYGVQAMAALLRFLPERDPHPHLYEALSVILDHLHEPADAGELFVRFELAVLNDLGFGLDLFECVATGSRENLCYVSPKSGRAVSREAGAPWADKMLALPAFLGDERRHAADAAALADGFRLTAFFLNRHVCEPRGLELASARDGFIQAALKALGTPRHDQPREAHA*