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SCNpilot_expt_1000_bf_scaffold_79882_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2..589

Top 3 Functional Annotations

Value Algorithm Source
oxidoreductase n=1 Tax=Paracoccus sp. N5 RepID=UPI00037937E8 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 159.0
  • Bit_score: 215
  • Evalue 6.40e-53
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EYR84419.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 161.0
  • Bit_score: 285
  • Evalue 5.40e-74
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 158.0
  • Bit_score: 176
  • Evalue 6.10e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTCTTCGGCGTCACCTATGCCTATGCCGCTTATGCCATGGTGCGGCATGCACGCGCGATGGCGCGCAGCGGCGCGCTCGGCGCGCTGAAGCAGGTGCATGTCGAATATTTCCAGGAATGGGCGCTGACGCCACTGAGCGATGCGGGCGCCGGCGCGCAATGGCGCATCGATCCGGCCGTCGTCGGCCCGGCCTTCACGACCGGGGACATCGGCACCCATTGCCATCATCTGGGCGCCTTCGTTTGCGGCCGCCCCGTGACGCGCCTGAGAGCGGAATTCCACACGCTCGGCCCCGAAAAGCCGCTGGAGGACACCGCCTTCATGCATGTGCGCTACGAGGGCGACATCCCCGGCACCATCATGATCTCCCAGGTGGCTGCCGGGACGCATTGCGGCATCCGGCTGCGGGTGTTCGGGGAAAAGGCGAGCCTCGAATGGAACCAGGAGGAGCCGGAACTCCTGCACTTCCGCCCCTTCGCCGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGCGTTCATGCGGCACGGTTCGTCCATATGCCGCGTGGCCACCCCGAAGCCTTGA
PROTEIN sequence
Length: 196
VFGVTYAYAAYAMVRHARAMARSGALGALKQVHVEYFQEWALTPLSDAGAGAQWRIDPAVVGPAFTTGDIGTHCHHLGAFVCGRPVTRLRAEFHTLGPEKPLEDTAFMHVRYEGDIPGTIMISQVAAGTHCGIRLRVFGEKASLEWNQEEPELLHFRPFAEXXXXXXXXXXXXXXXXSAFMRHGSSICRVATPKP*