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SCNpilot_expt_1000_bf_scaffold_83907_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(2..310)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport system permease protein DppC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBG8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 203
  • Evalue 1.30e-49
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR81655.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 203
  • Evalue 1.90e-49
putative permease component of ABC transporter; K02034 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 103.0
  • Bit_score: 163
  • Evalue 3.70e-38

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGCGGGTGCTGAAGGAACTGTGCCGCCAGCCCGCGGCGGTGTTCGGTCTTGTCATCGTTCTTGCCGTGGTCATCGCCGCCATCGCCGCGCCATGGCTGGCGCCCTATGCGCCTGACAACCAGATGTTCGAGGGCCTGACGATCGAGGGCGCGCCGATGCCGCCCGGCGGGGAATTCCTGCTCGGCACGGACACGCTTGGCCGCGACCTGCTCTCGCGCCTGCTCTACGGCGCCCGCACCTCGCTGATCATCGGCCTCGTCGCCAATGGCGTCGCCGTCACCATCGGCCTCTTCGTCGGCATCACGGCG
PROTEIN sequence
Length: 103
MRVLKELCRQPAAVFGLVIVLAVVIAAIAAPWLAPYAPDNQMFEGLTIEGAPMPPGGEFLLGTDTLGRDLLSRLLYGARTSLIIGLVANGVAVTIGLFVGITA