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SCNpilot_expt_1000_bf_scaffold_1176_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 5394..6830

Top 3 Functional Annotations

Value Algorithm Source
Flagellar hook-length control protein FliK n=1 Tax=Rhizobium sp. CF142 RepID=J2AQV1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 503.0
  • Bit_score: 274
  • Evalue 2.80e-70
Flagellar hook-length control protein FliK {ECO:0000313|EMBL:EJJ25650.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 503.0
  • Bit_score: 274
  • Evalue 4.00e-70
motD; chemotaxis motility protein; K10565 chemotaxis protein MotD similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 498.0
  • Bit_score: 270
  • Evalue 7.60e-70

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
TTGCCGGGGTTGAATGCGGCCGCATCGGCCAAACCCGCTGCCAAGCACGGCCAGCAAGGCCAGTCGGAAAACGGTGGCTTCGGCGAGACGCTCGATCAGGTCGGGCATGGCGACCACCGGAATGGGCAGAAAGCGGCGGCCGACGGCAAGTCGCAAAAGCCGGCCGACGATCTTCCGGACGCGACGCCGGAGCAGGCAGGCGAAACGGCCGAAGCGCCGATTGCAGGGGTTGGTGCAAATCGTATCAAGAAGCCGATCATCGACATTCAGCAAGGCGCGTCCCAGCGTCAGGCGGCGCAGCATCTTTTCCAGGCAGGCTCCGCGATCTCCGAGGCCAAGGCTGCCACGGCAAAATCGAAGGCTGGGCTTGACAAGCTTCCCCAGCATGCCGACGAGGTGGAACCGCAGTCGGCGTCCGACCTTGCCGTCAAGGGTGGAGGCACCCATGCCCGCAAGTCGGTGGCTGGCGCACTGGCCGATATGAATGCCAAGGTCGATGATACCCAGGTTGACCCCGCCGCGACCGCAGGTGCAACGTCCAGCGACGACGTGATGTCCTTGCTCGGAGCGGAAAACGCTCGCGAAATCGGGCAGGTTGTGCCGGCAACGTCGGAAAGGCACGCCGACGGCGTCGGTCGGACGAAAATGGCGCCCCATGATGTTTCCGGCAAGGATGTGGCAAGCGGCCTGGGCGGCGAAGACATAGCCGCCACGGAGAGCGATGGCAACGACGCCAGGACATTCCGCTTCTCCCGCGCCGATGGCAAGGGCCGGACGATGGACATGATCGTCGGCGGACGCGAAAGCAACGGTGCTGTCGACGAACCGCGGCGCACGACGTCGGTCGAAACGGTGACCGTGCTCGATTCCCGGCGGTATCTCGGCCTGGCGCCGAATTCCAGCGCCGTCCTGGATGCGATTTCCGGCGATTCCGAGTGGGTGAAGGCAATGCAGCCGAGCAGCGCCTTGTCCAATGCCGCGACCCAGGCCAGCACCGGCAAGGTGGTGAATATGCTGAAGCTGCAGCTGCAGCCCATCTCGCTCGGCATGGTGACGGCGACGATGCGGCTTGTGGGCGACGAGTTGTCGGTGGATCTGATGGTCGAGAATACCTCCGCCTACCGGCAACTGAGCAGCGACCACAAAAGCATCATCGAGGCGCTGCGCGCGCAAGGTTTCTCGATCGACCAGGTGACCGTTACCCTGGCGCCGACGAGCAACGCCGACAGCAGCAACAGCAGCACCCAGAACGGCAACCAGAACGCTTCGTTCGGCCAGCAGGGGGCGCAGGACGGCAGCGGCGGCGCTGCTTCCCGAAGGGACGAGAGAAATGCAGCGCAACAGCAATGGAGCAATGCTTCGCAATCTGGCGAGAATGGCCTCAGCGACGGCGGTGCCGGCTCTGCTGGCGCTCGTTCTGGGCATCTCTACCTCTGA
PROTEIN sequence
Length: 479
LPGLNAAASAKPAAKHGQQGQSENGGFGETLDQVGHGDHRNGQKAAADGKSQKPADDLPDATPEQAGETAEAPIAGVGANRIKKPIIDIQQGASQRQAAQHLFQAGSAISEAKAATAKSKAGLDKLPQHADEVEPQSASDLAVKGGGTHARKSVAGALADMNAKVDDTQVDPAATAGATSSDDVMSLLGAENAREIGQVVPATSERHADGVGRTKMAPHDVSGKDVASGLGGEDIAATESDGNDARTFRFSRADGKGRTMDMIVGGRESNGAVDEPRRTTSVETVTVLDSRRYLGLAPNSSAVLDAISGDSEWVKAMQPSSALSNAATQASTGKVVNMLKLQLQPISLGMVTATMRLVGDELSVDLMVENTSAYRQLSSDHKSIIEALRAQGFSIDQVTVTLAPTSNADSSNSSTQNGNQNASFGQQGAQDGSGGAASRRDERNAAQQQWSNASQSGENGLSDGGAGSAGARSGHLYL*