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SCNpilot_expt_1000_bf_scaffold_1146_15

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 12205..13485

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 432.0
  • Bit_score: 798
  • Evalue 4.20e-228
Serine hydroxymethyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKS9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 432.0
  • Bit_score: 798
  • Evalue 3.00e-228
  • rbh
glyA; serine hydroxymethyltransferase similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 432.0
  • Bit_score: 798
  • Evalue 9.30e-229
  • rbh

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGACGAACACCGAAGCCTTCTTCACCCGTCCGCTTGCCGAATCCGATCCGGATATTTTCGGTGCGATCGAGAAGGAACTCGGCCGCCAGCGCCACGAGATCGAGCTTATCGCCTCGGAAAACATCGTGTCGCGCGCCGTGCTCGAAGCGCAGGGCTCGATCATGACCAACAAATATGCCGAGGGTTATCCGGGCAAGCGTTATTATGGCGGNNNNNNCGCCGAAGAACTGGCGATCGAGCGCGCCAAGAAGCTGTTCGGCGTCGGCTTCGCCAACGTCCAGCCGAACTCCGGTTCGCAGATGAACCAGGCGGTGTTCCTGGCGCTGCTGCAGCCGGGCGATACCTTCATGGGCCTCGACCTGAATTCGGGCGGTCACCTGACGCACGGCTCGCCGGTCAACATGTCGGGCAAATGGTTCAACGTTGTGTCCTACGGCGTGCGTGAAGGCGACAACCTGCTCGACATGGACGAGGTCGCCCGCAAGGCCGACGAGCACAAGCCGAAGCTGATCATCGCCGGCGGTACTGCTTACTCGCGCATCTGGGACTGGAAGCGCTTCCGCGAGATCGCCGACTCGGTCGGCGCCTACCTGATGGTCGACATGGCCCACATCGCCGGCCTCGTTGCCGGTGGCCAGCATCCGTCGCCGTTCCCGCATTGCCATGTCGCCACGACGACCACCCACAAGTCGCTGCGCGGCCCGCGCGGCGGCATGATCCTCACCAACGAAGAGGATCTGGCGAAGAAGTTCAATTCGGCCGTGTTCCCCGGCCTGCAGGGCGGCCCGCTGATGCACGTCATCGCCGCAAAGGCCGTGGCGCTCGGCGAGGCGCTGCAGCCGTCCTTCAAGGATTATGCCGCCCAGATCGTCAAGAACGCCAAGGCGCTCTCCGAAACGCTGGTCGCCGGCGGTGTCGACGTCGTCTCGGGCGGCACCGACAACCACCTGATGCTCGTCGACCTGCGCAAGAAGAACGCCACCGGCAAGCGCGCCGAGGCGGCTCTCGGCCGCGCCTACATCACCTGCAACAAGAACGGCATCCCCTTCGACCCGGAAAAGCCCTTCGTCACCTCCGGTGTCCGTCTCGGCACGCCGGCCGGTACGACGCGCGGCTTCAAGGAAGCCGAGTTCAAGGAAATCGGCAACCTGATCATCGAGGTGCTCGATGGTCTGAAGGTCGCCAACTCCGATGAGGGCAATGCGAGCGTCGAAGCCACCGTACGCGAAAAGGTCGTCAAGCTGACCGGCCGTTTCCCGATGTACGGCTACATGGCCTGA
PROTEIN sequence
Length: 427
MTNTEAFFTRPLAESDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGXXXAEELAIERAKKLFGVGFANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVARKADEHKPKLIIAGGTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILTNEEDLAKKFNSAVFPGLQGGPLMHVIAAKAVALGEALQPSFKDYAAQIVKNAKALSETLVAGGVDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFKEIGNLIIEVLDGLKVANSDEGNASVEATVREKVVKLTGRFPMYGYMA*