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SCNpilot_expt_1000_bf_scaffold_1228_21

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 16656..17240

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI000362A9DF similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 194.0
  • Bit_score: 326
  • Evalue 1.50e-86
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF59150.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 194.0
  • Bit_score: 325
  • Evalue 4.70e-86
transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 194.0
  • Bit_score: 323
  • Evalue 5.20e-86

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCACATCGCCCCGCACCTGAAACCCTTTCTCGATGCGCATCCGGACCTGACGCTCAACCTGGTGCTGACCGACGAATTCACCGATATCGTCGGCGGCGGTTTCGACCTTGCCATCCGCATTGCCGAACTGGGAGATTCCAGCCTCGTCGCGCGGCGGCTGGCGCCGGTGCGCCGTGTCCTCTGCGCCGCGCCCGCCTATCTGGCCAGCTACGGCACGCCCGAAGATGTCGAGGCGCTGAAACACCACACCTGCCTTCGGCCACACAACAACGACGCCTGGCGGCTGGAGGGACCCGGCGGCGCCGTGCTCTATCGTCCGGAAGGCCGGCTTGTCACCAATTCCAGCGAGGTGATCCGCGAAGCCGTCATCGCCGGCTTCGGCATCGCGCTCCGCTCCACCTGGGATGTCGGGCAGGAACTGAAGGACGGTCGCCTGGTGCGCGTGCTGCCGTCCTACGAAGGCTCGCGCAACGTCACCCTGTCCGCCGTCTATCCCAGCCGGCAGTTCTTGCCCGCCAAGGTGCGGCTGCTGATCGACTATCTGGCGGAATTGTATGGGCCGGTGCCGTATTGGGAACGGTAG
PROTEIN sequence
Length: 195
MHIAPHLKPFLDAHPDLTLNLVLTDEFTDIVGGGFDLAIRIAELGDSSLVARRLAPVRRVLCAAPAYLASYGTPEDVEALKHHTCLRPHNNDAWRLEGPGGAVLYRPEGRLVTNSSEVIREAVIAGFGIALRSTWDVGQELKDGRLVRVLPSYEGSRNVTLSAVYPSRQFLPAKVRLLIDYLAELYGPVPYWER*