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SCNpilot_expt_1000_bf_scaffold_2461_18

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 13458..13907

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4L5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 115.0
  • Bit_score: 221
  • Evalue 6.90e-55
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 115.0
  • Bit_score: 225
  • Evalue 5.10e-56
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 115.0
  • Bit_score: 220
  • Evalue 2.80e-55

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCCGAAGGCCAGAATCTCGGTGTCGTCGCGACCGACCAGGCTCTCAAGCTTGCGGAAGAAGCTGGCCTCGATCTCNNNNNNNNNNNNNNNNNNNNNNNNACCGCCGGTCTGCAAGATTCTCGATCTCGGCAAGCTGAAGTATTCGACGCAGAAAAAAGCCGCCGAAGCCCGCAAGAAGCAGAAGATCGTCGAAGTCAAAGAAATCAAGATGCGCCCGAACATCGACACCCATGACTATGAGGTGAAGATGAAGGCGATGAACCGCTTCTTCGAAGAAGGCGACAAGGTAAAAGTGACGCTGAAGTTCCGCGGCCGTGAAATGGCCCACCAGGAACTCGGCCTCAAGCTTTTGCTGCAGGTCAAGGAGGATACGCTCGGTATCGCCAAGGTCGAAGCCGAACCGAAGCTGGAAGGCCGTCAGATGATGATGGTCCTGGCGCCGAAATAA
PROTEIN sequence
Length: 150
MPKARISVSSRPTRLSSLRKKLASIXXXXXXXXXPPVCKILDLGKLKYSTQKKAAEARKKQKIVEVKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVTLKFRGREMAHQELGLKLLLQVKEDTLGIAKVEAEPKLEGRQMMMVLAPK*