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SCNpilot_expt_1000_bf_scaffold_2642_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4720..5187

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI0003703102 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 155.0
  • Bit_score: 148
  • Evalue 7.70e-33
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 156.0
  • Bit_score: 127
  • Evalue 3.40e-27
Transcriptional regulator {ECO:0000313|EMBL:ADZ72763.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 156.0
  • Bit_score: 127
  • Evalue 1.50e-26

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
GTGAGAACGCATTTCGGCGTGGATGACAGAGACGAGTTCGCCTCGAAATTGGGCATCAGCAAAAGTGCGCTCGCTCATTATGAGCGTGGGGAGCGCGTGCCTGACGCATCGGTGCTCGCGGCATATCACGAGCACCTCGGGATCAATGTGAGTTGGCTGGTGAGCGGCGCGGGATCGATGTTCGATGACGCCTCCAAGGCTCCAGCGCCGTCTCTGCAGGTCGATCCTCTGCTAATGGAAAAACTCTATAAGGCCGTTCAGGCGGCTTACGCCCAAGCCGGCCAGAAACCGCCGGCGCATCGTATCGCCCACGAAGCTGCAGCGCTCTTCAACGATCTTCTGGCGCGAGTGAGTGATGTGCGCGATGATCTGATCGTCAACGCTGTCATTCCCACCTTGGCGACCGAGTTGGTGGAACGACTATCCCGCGCAGCGGAGGAACCCGGAACCGGTAAACGTTTGGCTTGA
PROTEIN sequence
Length: 156
VRTHFGVDDRDEFASKLGISKSALAHYERGERVPDASVLAAYHEHLGINVSWLVSGAGSMFDDASKAPAPSLQVDPLLMEKLYKAVQAAYAQAGQKPPAHRIAHEAAALFNDLLARVSDVRDDLIVNAVIPTLATELVERLSRAAEEPGTGKRLA*