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SCNpilot_expt_1000_bf_scaffold_3496_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(10662..11654)

Top 3 Functional Annotations

Value Algorithm Source
Na+/proline symporter n=1 Tax=Rhizobium sp. CF142 RepID=J1T6M2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 306.0
  • Bit_score: 504
  • Evalue 9.00e-140
Na+/proline symporter {ECO:0000313|EMBL:EJJ27336.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 306.0
  • Bit_score: 504
  • Evalue 1.30e-139
PAS/PAC sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 313.0
  • Bit_score: 487
  • Evalue 4.70e-135

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCTGCCAGGCTGGGTCATATTCGCATCGGCGATCGGCTATCTGCTGCTGCTGTTTGCGGTCGCGAGTTACGGCGACCGGGTGAGCCAGGTCAGGGGCGCGCCCAACAAGGGCCGGCCGATCGTCTATGCGCTCAGTCTCGCCATCTACTGCACCTCCTGGACCTATTTCGGCGGCGTCGGCCTCGCGGCCGAACGCGGCCTCGAATTCGCGGCGATCTATATCGGACCGATCCTCGTCTTCACCCTCGGCATGCCGGTGCTCCGGCGCATCACCGAGCTCGCCAAGGCGGAAAAACTGACCTCCGTGGCGGATTTCATCGCTGCCCGCTACGGCAAGAATTCCACCGTCGCCGGCATCGTCGCGCTGATCTGCCTCGTCGGCGCCATCCCCTATATCGCCCTGCAGCTGAAGGCGGTCTCCAATTCCGTCTCGGCGATCGTCAATCCTTCCGACTACGGCATCGGCAGCGGCAACCTCTATTTCATCGACCTGCCGCTGGTCGTCACCCTGGTGCTCGCCTGCTTCGCGGTGATGTTCGGTACGCGCCACACCGACGCCACCGAACACCAGGACGGCCTGATCCTGGCGATCGCGATGGAATCGCTGGTGAAGCTCGTCGCGTTCGGAACGGTCGGCATATCGGTGCTCTTCCTGTTCTTCGACGGACCGTGGGATCTCTGGACCAAGGCCTCGGAAAATGCGCGGGTGATGGCGGCACTCAGCTATGAAACGCCGCTCAGCCGCTGGATCACGCTGACCATTCTCTCGGCCTTCGCCATCATCCTGCTGCCGCGGCAGTTCCACGTCACCGTGGTGGAAAACCGCACCAAGGGCGAACTGAGGCTCGCCGGCACGTTGCTCCCGGTCTATCTCGTCGCCATCAACATCTTCGTGCTGCCGGTCGCCATCGGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCGCCAACGCGATGCACACTGTGTCGCTGA
PROTEIN sequence
Length: 331
MLPGWVIFASAIGYLLLLFAVASYGDRVSQVRGAPNKGRPIVYALSLAIYCTSWTYFGGVGLAAERGLEFAAIYIGPILVFTLGMPVLRRITELAKAEKLTSVADFIAARYGKNSTVAGIVALICLVGAIPYIALQLKAVSNSVSAIVNPSDYGIGSGNLYFIDLPLVVTLVLACFAVMFGTRHTDATEHQDGLILAIAMESLVKLVAFGTVGISVLFLFFDGPWDLWTKASENARVMAALSYETPLSRWITLTILSAFAIILLPRQFHVTVVENRTKGELRLAGTLLPVYLVAINIFVLPVAIGGXXXXXXXXXXXXXXXSPTRCTLCR*