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SCNpilot_expt_1000_bf_scaffold_3496_9

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 11850..12113

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F954_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 57.0
  • Bit_score: 111
  • Evalue 3.40e-22
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 57.0
  • Bit_score: 111
  • Evalue 4.80e-22
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 58.0
  • Bit_score: 105
  • Evalue 7.80e-21

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGCTCAATGAATTCAAGACATTTATCGCGCGCGGCAACGTCATGGACCTTGCCGTCGGCGTCATCATCGGCGGCGCCTTCGGCCTGATCGTCAATTCGCTGGTCAATGACATCGTCATGCCGATCGTCGGCGTCATCTTCGGCGGGTTCGACTTCTCCAACTATTTCATTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGCGCCGTCTTCGCCTACGGCAACTTCATCACCGTCGTCATCAACTTCATGA
PROTEIN sequence
Length: 88
MLNEFKTFIARGNVMDLAVGVIIGGAFGLIVNSLVNDIVMPIVGVIFGGFDFSNYFIPXXXXXXXXXXXXKAPSSPTATSSPSSSTS*