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SCNpilot_expt_1000_bf_scaffold_4184_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(10617..11522)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 301.0
  • Bit_score: 541
  • Evalue 8.50e-151
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 301.0
  • Bit_score: 529
  • Evalue 5.70e-148
  • rbh
Diaminopimelate epimerase n=1 Tax=Rhizobium sp. CF122 RepID=J2ICX0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 301.0
  • Bit_score: 541
  • Evalue 6.00e-151
  • rbh

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAGTTATACGGTCGAATTCGCGAAGATGAACGGGCTTGGCAACAAGATCCTGGTGGTCGACATGCGTGGCCGGAAAGACAAGGTGACCCCGGACGCGGCGATCGCGCTGAATGCCGACCCCGCCACCCAGTTCGACCAGATCATGGCGGTCTACGATCCCAAGGCGGATGGCACGGATGCCTGGATCGACATCCTGAATTGTGATGGCTCCAAGGCGCAGGCCTGCGGCAACGGTACGCGTTGCGTGGTGCAGGCGCTGGCCGCCGAGAGCGGCAAGAAGACGTTTACCTTCCAGACGGTGGCCGGCATCCTCAATGCCGTCGAGCATGCCGACGGCACGATTTCCGTCGACATGGGCAAGCCGGTGTTTGCCTGGGACCGCATTCCGCTGGCGGAGGAATTTTACGATACCAGCCGCATCGAGCTGCAGATCGGCCCGATCGACAATCCGGTGCTGCATTCGCCCTCAGTCATGTCGATGGGCAATCCGCATGCCGTCTTCTGGGTCGACCAGGACGTGATGTCTTACGATCTGCACCGTTTCGGCCCGCTGCTCGAAAACCATCCGATGTTTCCGGAAAAGGCCAATATCACGCTGGCGCAGGTCACCTCGCCCTCGTCGCTGACCACCCGCACCTGGGAGCGCGGCGCCGGGCTGACGCTCGCCTGCGGCTCGGCCGCCTGCGCGTCGGGTGTTTCCGCCGCCCGCACCGGCCGGACTGGGCGCAATGTCACCATCACCGTCGCCAGCAGCCCGAACCGTGGCAGCCTCACCATCGAATGGCGCGAGCGCGACGATCACGTCATCATGACCGGCCCGGCGGAATGGGAATGGTCCGGCACGCTCGATCCTTCGACCGGCGCCTGGGCGCGCGAAACGGAAGCGGGGGCCAAGGCGCAGTGA
PROTEIN sequence
Length: 302
MSYTVEFAKMNGLGNKILVVDMRGRKDKVTPDAAIALNADPATQFDQIMAVYDPKADGTDAWIDILNCDGSKAQACGNGTRCVVQALAAESGKKTFTFQTVAGILNAVEHADGTISVDMGKPVFAWDRIPLAEEFYDTSRIELQIGPIDNPVLHSPSVMSMGNPHAVFWVDQDVMSYDLHRFGPLLENHPMFPEKANITLAQVTSPSSLTTRTWERGAGLTLACGSAACASGVSAARTGRTGRNVTITVASSPNRGSLTIEWRERDDHVIMTGPAEWEWSGTLDPSTGAWARETEAGAKAQ*