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SCNpilot_expt_1000_bf_scaffold_4184_16

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 14292..14840

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRM9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 182.0
  • Bit_score: 313
  • Evalue 1.20e-82
  • rbh
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 182.0
  • Bit_score: 313
  • Evalue 3.90e-83
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 182.0
  • Bit_score: 313
  • Evalue 1.70e-82

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGCAAGTTAGAGAATCCCATCCTGATGGCGACGGTCGGCGCGGCGCAGGGGCTGCGCGGCGAAGTGCGCGTCAAGGCCTTCAGCGCCGATCCCATGGCGCTCGGCGATTACGGCAACCTGCACAGCCTCGACGGCCGGACCTTTGAAGTCCTCGATATCCGCGAAGGCAAGAACGTGGTCATCGTCCGCTTCCGCGGCGTCAACGACCGCAACGCCGCCGAAGCCCTCAACGGCCTGGAACTCTATGTCGAGCGCGACAACCTGCCCGACGACGAACTCGACGACGACGAATTCTTCTATGCCGACCTCGAAGGCCTCGAAGCCGTCGACAGCGACGGCAAGAGTTACGGCACCGTCAGCGCCATCTACGATTTCGGCGCCGGCGACCTGCTGGAACTCAAGGGCCCGGGCCGCCGGCCGGTGCTCATTCCCTTCTCGGAAAAGGCAGTGCTCGACATCGATCTCGAAGGCGGCACGATCCTCATCGACCCCTTGGCCGCCGGCCTGATCGACAGCCCCGACAATCTTCCCGGCTCCGATCAATGA
PROTEIN sequence
Length: 183
MSKLENPILMATVGAAQGLRGEVRVKAFSADPMALGDYGNLHSLDGRTFEVLDIREGKNVVIVRFRGVNDRNAAEALNGLELYVERDNLPDDELDDDEFFYADLEGLEAVDSDGKSYGTVSAIYDFGAGDLLELKGPGRRPVLIPFSEKAVLDIDLEGGTILIDPLAAGLIDSPDNLPGSDQ*