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SCNpilot_expt_1000_bf_scaffold_4006_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1221..2633

Top 3 Functional Annotations

Value Algorithm Source
dld; D-lactate dehydrogenase (cytochrome) protein (EC:1.1.2.4); K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 470.0
  • Bit_score: 752
  • Evalue 6.50e-215
  • rbh
Glycolate oxidase subunit GlcD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXS7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 467.0
  • Bit_score: 767
  • Evalue 1.10e-218
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:EYR81739.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 467.0
  • Bit_score: 767
  • Evalue 1.50e-218

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGCATTGTCGGATCTCCGCGCGGGCGAGCGGAACGAAGCCGGTATCGCCAGTGTTCTGGGCATTCTGAAGCAGGCGTTCGGCGAGCGTTTTCAGACGGGCGAGACGCTGCGCTACCAGCATGCGCACACCACGACCTATATTCCGGCGCAGCTGCCGGATGGGGTCGTCTTTGCCGAAAGCGCCGATGACGTGAAGACGGTGGTGCGCGCCTGCGCCGACCACCGGGTGCCTGTCATTCCGTTCGGCACCGGCTCCTCCCTCGAAGGCCAGGTGAATGCGCCGTCCGGCGGAATATCGATCGATTTCAGCCGGATGAACCGCATTCTCGAAGTCAATCCGGAAGATCTGGACTGCACGGTCGAGCCCGGCGTCACGCGCGAGCAGCTGAACGCCTACCTGCGTGACACCGGCCTGTTCTTCCCGATCGATCCCGGCGCCAACGCCTCGATCGGCGGCATGACCTCGACGCGGGCGTCCGGCACCAATGCGGTGCGCTACGGCACGATGAAGGACAATGTGCTGGCGGTGACCGCCGTCGTTGCCAATGGCGAGGAGGTGCGCACCGCCCGGCGCGCCCGCAAATCGTCGGCAGGCTATGACATGACGCGGCTCTTCGTCGGCGCGGAAGGCACGCTCGGCGTGCTGACTTCGGTGACGCTCAAGCTGCAGGGCATTCCGGCCGTCATCGCCGGCGGCGTCTGCGGCTTTCCATCGCTCCGGGATGCCTCCAATGCGGTGATCACGACGATCCAGCTCGGCATTCCCGTCGCCCGCATCGAACTCGTCAACACCCTGCAGATCAAGGCCTGCAACGCCTATTCCGGGCTGACGCTGGCCGAGCGGCCGACGCTGTTCGTCGAGTTCCACGGCAATGAGGAAAGTGTGGCGCTGCAATCGCAGCAGTTCGCCGAAATCGTTGCCGAATGCGGGGGTGGTGCGTTTGAATGGACGGCCGATCCGCAGGCTCGCGCCAAGCTGTGGAAAGCCCGTCACGATGTCTATTTCGCCGCCAAAAACCTGAAGCCGGGCGCGGCGGTGATTGCGACCGACGTCTGCGTGCCGATCTCGCGGCTTGCCGATTGCGTCGCCGAGACCGAAGAGGATATCGACGCCCACGGGCTGATCGCGCCGATCGTCGGCCATGCCGGCGACGGCAATTTCCACGTCAGCCTGGTGCTCGACGACAAGGACGCCGCCGACGTGAAGAAGGCGGAAGAATTCGTGGCGCGGCTCAATGCGCGGGCGCTGGCCATGGACGGCACCTGCACCGGCGAACACGGCATCGGCCAGGGCAAGATACCCTATCTGGAACAGGAGCTTGGCGGCACGGTCGACCTGATGCGGCAGATCAAGCGCGCGCTCGATCCCGACAACATCTTCAACCCCGGAAAGATCTTCTATCTCGGCTGA
PROTEIN sequence
Length: 471
MALSDLRAGERNEAGIASVLGILKQAFGERFQTGETLRYQHAHTTTYIPAQLPDGVVFAESADDVKTVVRACADHRVPVIPFGTGSSLEGQVNAPSGGISIDFSRMNRILEVNPEDLDCTVEPGVTREQLNAYLRDTGLFFPIDPGANASIGGMTSTRASGTNAVRYGTMKDNVLAVTAVVANGEEVRTARRARKSSAGYDMTRLFVGAEGTLGVLTSVTLKLQGIPAVIAGGVCGFPSLRDASNAVITTIQLGIPVARIELVNTLQIKACNAYSGLTLAERPTLFVEFHGNEESVALQSQQFAEIVAECGGGAFEWTADPQARAKLWKARHDVYFAAKNLKPGAAVIATDVCVPISRLADCVAETEEDIDAHGLIAPIVGHAGDGNFHVSLVLDDKDAADVKKAEEFVARLNARALAMDGTCTGEHGIGQGKIPYLEQELGGTVDLMRQIKRALDPDNIFNPGKIFYLG*