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SCNpilot_expt_1000_bf_scaffold_4006_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 2811..6629

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein involved in colicin uptake n=1 Tax=Rhizobium sp. CF142 RepID=J2LAQ1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 999.99
  • Bit_score: 1473
  • Evalue 0.0
  • rbh
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:EJJ30572.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 999.99
  • Bit_score: 1473
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 999.99
  • Bit_score: 1446
  • Evalue 0.0
  • rbh

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3819
GTGCTAGGACGGATTCTGGTGTTCCTCGGCGGCGTGCTGGTGGTGCTGCTGTTTGCAGCGCTTCTCGCACCGCTCTTTGTCGACTGGACCGACTTCCGCAAGGATTTTGAGCAGCAGGCCAGCCGCATCATCGGCAAGAAGGTGGTCGTTCACGGCGCCGTCGATGCCCGCATCCTTCCCTTTCCTTCGGTGACCCTGCATGACGTGCGTGTCGGCCAGGAAGAGGACGGCACGCCGCTGGTCAAGGTCGAGCGTTTCTCCATGGACGCCGAGCTTGCCCCCTTTCTCAGCGGCGAGGCGCTGATCTTCGACATGCGTATCGAGGAGCCGGTCGCCCGCATCCGCCTGCTGCAGGACGGCACGCTGGACTGGATGCGCGGCAGCCAGGCCGATATCCCGGCGCGGTCCGTCGTGCTCGAAAACGTCCACATCACCGGCGGGCAGATCGATTTCATCGACGAGCAGTCCGGCCGCACGCGGCGTATCTCCGATCTCAACGCGGAAATGTCGGCGAAATCGCTGGCGGGGCCGTGGCGCGTGGAAGGAAGTGCGGCGCTGGACGGCGAGAAGGGCGCCTTTTCGCTGACGAGCACGCAGCCCGACGAGATCAGAAACGCGATGCGGCTGAAGACCCGCATCGTGCCGAACGGCCGCGCGCTCAGCGTCGATCTCGACGGCGAATTGAAGATCGTCGACAGCAAGCCGAGCTATCAGGGTGCTTTTACCGCCGCCTCGCTGGAGAAGGCCGACAACAAGCAGGCCGCGCCGGCTCCCCGCCTGTCGGGACAGTTCGAGCTGACCAACGAACGCATGCGCGTGCCCGAATATCGCCTGGAGATCGGCGATACGCAGGATCCCTATGTCGTCACCGGCGAGGCGACGCTCGACACCGGCAAGCAGCCGGAATTCCTGCTGACGGCCGATGGCCAGCAGATCGACGTCAACCGGATCGGCAATCGCGGCACCGAAGGCAAGACCGGCCGGGATGCCGCCATTTCGGCGCACCAGCGTCTGAATACGCTGATCGGCATCCTTGCCGATATCCCCGTGCCGCAGGTGCCGGGGCGGGCCAGCCTGAAACTCCCCGCCATCGTCGTCGGCGATACCACCATCCGCGACGTGCGTCTCGACGTGCGTCCTGATGGCGGCGGCTGGGCGATCGACAATGCCGTGGCGATCTTCCCGGGGCGCACCCAGGTGGAGGCCAAGGGCAATCTCGTGCTCCGTGGCGAACCGTCCTTTACCGGCGACATGCTGGTGGCCTCGACGCAGCCTTCCGGCCTGTCGAGCTGGCTGTCCGGCAATGTCGATCCGGTCATCCGCCAGTTGAAGACCGCGGGCTTTTCCGCCTCCGTCAGCCTGACGCCCGAACTGCAGCGCTTCGAGCGGCTGGAATTCGTCGTCGGCCAGGAGGTGATGCGTGGCCGCATCGAGCGGCAAGCTGTTGCGGGCGAACGGCCGAGCCTGTCGATGGACCTCAACGGCAATGCCATCGATCTCGACGTGTTGCGGGCGCTGGCAGGCATCTTCGCCGGCAAGGATGCCGACAGCGGTTTCCTGGAGCATCGCATCGCCGCGCAGATGAAGGCGTCGAAATTCATCGCCTTCGGCGTCGAGGCCGAAAATGTCGATACGGTGTTCACCGTCGACGACGGCGCGTTGTCGCTGGAGCGGCTGACGATCGGCAACCTGTCCGGCGCGGCGCTGACCGCGATAGGACGCGCCGAAGGAGCGCTGACGGAGTATTCCGGCACCGGGCGCATGACATTCCAGGCCTTCGATCCCGGCCCGTTCCTGGCGATGCTGCAGGCGCATCTGCCGCACCATCCCGTCATCGGCCGGCTGGTGCGCAACGCCGCCTGGTTTGCCAATGCCGACCTGAAGCTGACGCTTTCGATCGGTGGCGAGCAGGGGCAGGGGCTGTCCGTCAAGCTGGCCGGCACCACAAACGGCAGCCGCGTCAACCTCGATTTCAAACTGCAGGATCTGCTCAGCATTTCCGACGGGGTCAACCTGGAGGCGACGCTCGAAAATCCGGTGACGTCGATCCTGTTCGGGCAGGCGGGTTTCGATCCGCTGCCGCTGGAAGCCGACAGCAACGGCGTGGTGGCGCTGAAGATCGCCAGCTCCGGCGGCACGACCGCAGATGCGACGGTGGCCTATACGACGAAACAGACCTCGTTCAACGCCTCAGGCAATATCGACCTGGCCGCGGAGCGGTTCCTCTCGGGCCAGATGAAGATGACGCTGGAGAGCGGCGATATCGAGCCCTACCTGATCATGAACGGCATCGGCCTGCCGCAGATCGGCTCCGGCCTGCCGATCAAGGCGACATCGGATCTCTCGGTGGACCCGGCGCAGATGACCTTCTCCAACGCCAGGATCGAGGGCGGCGGCAACATGCTGTCCGGCGGTATCACCTTCGACCGGCAGCAGGCCGTATTGACGGCTTCCGGCGATGTCAAGGTGACGACGGCCGATCTCGGCTGGATGGCGGAGGCGATCTACGGTCCGCTGCTCGATCCCGTCACCGGCGATTTTTCCTCGGCGCCGCTGCCGAAGCTGCTGGGTGGGCTCAATGCCAATGTGAAGCTGCGCGCCAGCAGTTTCTGGCCGGGTGTTTTCGGTCCGGTTCGTGATTTTACCAGCAACCTGAATTTCAAGGGCGACCAGCTGGTGCTGGACGACATCGACGGTGCATGGAGCGGTGGCAAGCTGTCCGGCCGGGTGCTGATGGGCAATTCCGAAGGCGCCGGTTTCCTGCAGACCCGTTTCGACGTCGAGGACGGCGATACCGCCGCCATCGCCTGGACGCACGGCGGGACATCCGTTGCCAATGGCCGCTTCGGTCTGACGATGACGGCCGAGGCGACCGGGCGGTCGGTGGCGGAGATCGTCCATGGCGCCAGCGGTTCCGGCGAACTCAATCTCGCCGATACGACGGTGCAGGGCCTCAATCTCGGCCTGCTGCAGCCGCTGATGGCGGCTGCCGACGGCATGCAGGGCGAACTCGGCGCCGATCGCATCCTGCCGGTGGTCAAGAGCCTGGTTGCCGGCGAAACGGCATCGCTGGGTGCCGTCAGCGTTCCGTTCAATCTGACATCCGGCATGCTGCGGGTGCAAAACATCACCGCGGCCAACGAATTCGCCAGGCTGACCGCCGATGCGACGATCGATATCGCCGCCCACACGCTGGAAGCGGCGATGAACATCGCCTTCGCGCCGCCCGTCGATGCGCCGACCGGAACCGAGCCCGGCATCCACCTGCAGTTTTCCGGGCCGCTGGCATCGCCGGAGCAGGCGATCGACGTCACCGACGTCACCAATTTCCTGTCGATGCGCGCTTTCGAGCGTGAGCGGCGGCGGGTCGAGCGGCTGCAATCCAACGTCCTCGAAAAACAGCGCCTGCGGCGCGAGGTGGCGCTCTACAAGTTCCGTGCCGACGAACGGCGCGCGGCGCGCGAGCGGGCTGCCGAAGAGGAGCGCATCCGTAGCGGCGAGGAGCTTCGTCTGAGAAAGCTGGCAATCGAAAGAGAGGCGCAGCGCAAGGCTGAAGCGGATGCAAAGGCTGCGGCCGAAAGGGCGGAGCGCGAAAAGGCCGAGGCGGAACTGCGCGCGGCGGCGGAAAAGGCAGCACAGGAAAAGGCGGCAGCCGAAGCGCGTGCGGCAGCGGAAAAAGCCGCCAGGGACGAGGCGGCACGCGAGGTCCAACGCCGCTCCATGCCCGTCGGCGAGGAAGAAAAGGTCATCCGCGGCGGCGAGCTTGTCGCGCCGGACGGGCTGAATTTCGATGCCTTGCCAGGGGTGCAGCAACAGTAG
PROTEIN sequence
Length: 1273
VLGRILVFLGGVLVVLLFAALLAPLFVDWTDFRKDFEQQASRIIGKKVVVHGAVDARILPFPSVTLHDVRVGQEEDGTPLVKVERFSMDAELAPFLSGEALIFDMRIEEPVARIRLLQDGTLDWMRGSQADIPARSVVLENVHITGGQIDFIDEQSGRTRRISDLNAEMSAKSLAGPWRVEGSAALDGEKGAFSLTSTQPDEIRNAMRLKTRIVPNGRALSVDLDGELKIVDSKPSYQGAFTAASLEKADNKQAAPAPRLSGQFELTNERMRVPEYRLEIGDTQDPYVVTGEATLDTGKQPEFLLTADGQQIDVNRIGNRGTEGKTGRDAAISAHQRLNTLIGILADIPVPQVPGRASLKLPAIVVGDTTIRDVRLDVRPDGGGWAIDNAVAIFPGRTQVEAKGNLVLRGEPSFTGDMLVASTQPSGLSSWLSGNVDPVIRQLKTAGFSASVSLTPELQRFERLEFVVGQEVMRGRIERQAVAGERPSLSMDLNGNAIDLDVLRALAGIFAGKDADSGFLEHRIAAQMKASKFIAFGVEAENVDTVFTVDDGALSLERLTIGNLSGAALTAIGRAEGALTEYSGTGRMTFQAFDPGPFLAMLQAHLPHHPVIGRLVRNAAWFANADLKLTLSIGGEQGQGLSVKLAGTTNGSRVNLDFKLQDLLSISDGVNLEATLENPVTSILFGQAGFDPLPLEADSNGVVALKIASSGGTTADATVAYTTKQTSFNASGNIDLAAERFLSGQMKMTLESGDIEPYLIMNGIGLPQIGSGLPIKATSDLSVDPAQMTFSNARIEGGGNMLSGGITFDRQQAVLTASGDVKVTTADLGWMAEAIYGPLLDPVTGDFSSAPLPKLLGGLNANVKLRASSFWPGVFGPVRDFTSNLNFKGDQLVLDDIDGAWSGGKLSGRVLMGNSEGAGFLQTRFDVEDGDTAAIAWTHGGTSVANGRFGLTMTAEATGRSVAEIVHGASGSGELNLADTTVQGLNLGLLQPLMAAADGMQGELGADRILPVVKSLVAGETASLGAVSVPFNLTSGMLRVQNITAANEFARLTADATIDIAAHTLEAAMNIAFAPPVDAPTGTEPGIHLQFSGPLASPEQAIDVTDVTNFLSMRAFERERRRVERLQSNVLEKQRLRREVALYKFRADERRAARERAAEEERIRSGEELRLRKLAIEREAQRKAEADAKAAAERAEREKAEAELRAAAEKAAQEKAAAEARAAAEKAARDEAAREVQRRSMPVGEEEKVIRGGELVAPDGLNFDALPGVQQQ*