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SCNpilot_expt_1000_bf_scaffold_6785_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6373..7314

Top 3 Functional Annotations

Value Algorithm Source
Putative transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UV00_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 261.0
  • Bit_score: 445
  • Evalue 6.10e-122
Putative transporter {ECO:0000313|EMBL:ENN85500.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 261.0
  • Bit_score: 445
  • Evalue 8.60e-122
putative major facilitator superfamily (MFS) drug efflux transporter similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 261.0
  • Bit_score: 442
  • Evalue 1.20e-121

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
TTGCCTTTACCCCTGTTTGCGCTGTTTCTGGCAGCCTTCGCATTCGGCACCACGGAATTCGTCATCGCCGGGATTCTCCCCGATGTGGCGACAGGGCTTGGCGTGTCGATCCCTTTCGCCGGTTACCTGGTGTCCGGTTATGCCTTGGGCATTGCGGTAGGAGGACCGCTTTTGACCATGGCGACCCGGCGGATCTCGCGCCGTTCGATTCTCGTCGCGCTGACGATCGCCTTCTGCCTGGGGCAGGTCGCCTGCGCGATGGCGCCGAACTTTGCCGCCATGCTGCTTTTCCGCATCGGCACCTCCATCGCCCATGGCGCCTATTTCGGCATCGCGATGGTGGTTGCGGTCAGCCTGGTGCCGAATTCGGCGCGGGGGCGGGCGGTTGCCCTGGTGCTGGCGGGACTGACGGTTTCGAACATCATCGGCGTGCCGGCCGGCGCGGCGATCGGTGGGATCTGGGGATGGCGGGCGACATTCTGGGCGATGACGGTGATCGGCGTGCTTGCCTTGGTCGCCATCTGGTTGCTGATCCCGCAAACGAAGCTGGAGCGCCGCGAGGAGCATCATCTGGGCCGCGAAGTGCGCGTCCTCGGCCGCCAGCAGGTCTGGACATCGCTGATCATCATGCTCGCTTTGATGATGGGCCAGATGGTGCCGTTCACCTACATCACGCCGCTGCTGCAGGAGGTGACCGGCCTCGACGCCATGGTCGTTCCGTGGGTGCTGCTGCTCAACGGCGTCGGCGCGACGCTCGGTGTCTTCATCGGTGGCCGGCTGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGGCGGGGATGCTCGTCGTCCTTTATCTGGTCAGCCCCTATGCCGTGCCGATGGCGGTCGCGATCTTCATCTGGGGCGCGCTCAATTTTGCGATCGGCACTCCGGTGCAGGCCCGTATCCTGA
PROTEIN sequence
Length: 314
LPLPLFALFLAAFAFGTTEFVIAGILPDVATGLGVSIPFAGYLVSGYALGIAVGGPLLTMATRRISRRSILVALTIAFCLGQVACAMAPNFAAMLLFRIGTSIAHGAYFGIAMVVAVSLVPNSARGRAVALVLAGLTVSNIIGVPAGAAIGGIWGWRATFWAMTVIGVLALVAIWLLIPQTKLERREEHHLGREVRVLGRQQVWTSLIIMLALMMGQMVPFTYITPLLQEVTGLDAMVVPWVLLLNGVGATLGVFIGGRLAXXXXXXXXXXXXRRGCSSSFIWSAPMPCRWRSRSSSGARSILRSALRCRPVS*