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SCNpilot_expt_1000_bf_scaffold_904_23

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(22652..23947)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system periplasmic substrate-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QKC8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 425.0
  • Bit_score: 736
  • Evalue 1.80e-209
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42464.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 431.0
  • Bit_score: 742
  • Evalue 3.60e-211
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 423.0
  • Bit_score: 364
  • Evalue 4.50e-98
  • rbh

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAAGTTGAGGACGGCACTTTCCGCACTTGCGCTCGTCGGTAGCCTGGGAGCGACCATGCCTGCGGTCGCTCAGACCAAGCCGGATTCGCTGGGGCTGGGTATTTTCACGTTTACGTCCGGACCGGCCGCTGCTTACGGGATGCCCGGCAAGAACGCTGCGGACCTGATGATCGAGCAGATCAACGCAGCCGGCGGCATCGGCGGCGTGAAGATCGTGCCGACCTATGTCGATGAAGCCCAAGGCGCCCAAGGCGTCATCGCGGAGTATCGCCGCCTGTCTGGCGAGGCGAGCAATCAGGTGATGATTGCCGCGTTGTCGAGTGCGAACTGTCTCGCGCTGGCGCCTCTCGCCGAGCAGCTTCAGGTGCCGACGGTGGGCTGGAATTGCGATACGCATCATCTTCTGCTGGATGGCAAGAGCAAGTATGTGTTCCGTCCGAACGGCAACACCGTTCCCGAATTCGTCGCCTATGCGGTTTACCTTCTGGCCCGTAAGCCGGATGTAAAGACGGTTGCGATCATCAATCCGGACTATGCGTTCGGACATGATGCGGCGACGATCTTCAAGGCCGCGCTGAAAGCCCTGCGCCCGGATATCCAGGTGGTGGCCGAACTCTTCCCGAAGATGGGCTCGCCGAACTACCAGACCGAAATTTCGCGCCTGACCACGGCGCGGCCAGATGTCGTGTTCTCCAACCTTTGGGGTGCGGATCTCGAAAACTTCGTGCGGCAAGCGCAGCCGCGCGGTCTTTTCAGCTCCAGCCAAGTTGTCCTTGCGCTCGGCGAAACTGTGCTGCAGCGCGTGCCGCTGCCGGAGGGTGTGATCGTCGGCGTGCTCGGCGATGGCTGGTGGATGTCGCCAGACGCTGCGGCGAACGCGCAGACAAAGAAGTTTGTCGACGCGTATAAGGCTAAGTATGGCGAGTATCCGGTGTTCCCGTCGATCAAGATGGCGAATACGCTGCTCTACGTGAAGGCAGCCTATGAAGCCGCGATGAAGAAGAACGGTGGTAAGTGGCCGAGCCGCGCCGAACTCGTCGATGCGATGCGCGGAAGCAAGGTGCCGACGCTCACCGGCACCACTGTGACGCGTGCGGACAATGATGGCATGGTCGATCAGATCGTCGGCGTGACGGTGAAGTCGCCTAACCAGAGCTTCCCGGTGATCGGCGAGATGGTGCGTTACAAAGGCGATGCGCTGATGCCGAAGGAAGGACAGGATCCGATCGGCTGGATCTCGACCTTGACGCCGGCTTTTGCTGCTTCGCTTCCGAAGCCCGGTAGCTACAAGTAA
PROTEIN sequence
Length: 432
MKLRTALSALALVGSLGATMPAVAQTKPDSLGLGIFTFTSGPAAAYGMPGKNAADLMIEQINAAGGIGGVKIVPTYVDEAQGAQGVIAEYRRLSGEASNQVMIAALSSANCLALAPLAEQLQVPTVGWNCDTHHLLLDGKSKYVFRPNGNTVPEFVAYAVYLLARKPDVKTVAIINPDYAFGHDAATIFKAALKALRPDIQVVAELFPKMGSPNYQTEISRLTTARPDVVFSNLWGADLENFVRQAQPRGLFSSSQVVLALGETVLQRVPLPEGVIVGVLGDGWWMSPDAAANAQTKKFVDAYKAKYGEYPVFPSIKMANTLLYVKAAYEAAMKKNGGKWPSRAELVDAMRGSKVPTLTGTTVTRADNDGMVDQIVGVTVKSPNQSFPVIGEMVRYKGDALMPKEGQDPIGWISTLTPAFAASLPKPGSYK*