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SCNpilot_expt_1000_bf_scaffold_1472_16

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 15660..16637

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 323.0
  • Bit_score: 609
  • Evalue 2.70e-171
ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 324.0
  • Bit_score: 582
  • Evalue 1.00e-163
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P167_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 323.0
  • Bit_score: 609
  • Evalue 1.90e-171
  • rbh

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGACCCCTGAAGCTCAAAAACCGCAGCTTTCCGTCGTGCTTTGTTCCCCCCGGGGGTTCTGCGCCGGCGTTGTCCGGGCGATCGACACGGTCGAGCGCGCGCTGAAGCTCTATGGCGCGCCCGTCTATGTCCGTCACGAAATCGTGCATAACCGCTATGTGGTGGAAAGCCTGCGCGAAAAAGGGGCCATTTTCGTTGCGGAACTCAACGAAATTCCCCAGACCGACGCGCCGGTGGTGTTTTCCGCCCATGGCGTGCCGAAATCGATCCCAAGCGAGGCAGAAAAGCGCAATTTCTTCACGCTGGACGCCACCTGCCCGCTGGTAACCAAGGTTCACCGCGAGGCCGCGATCCATTTCAAGCGTGGCCGCGAAATCCTGCTGATCGGTCATGCCGGGCATCCCGAAGTGGTCGGCACCCTCGGCCAGTTGCCGAAGGACGCGGTCCTCCTGATCGAGACCATGGAGCAGGCGCGCACCTTCCAGCCGAAGGATGCCTCCAAGCTTGCCTTCGTCACCCAGACGACCCTGTCGATCGACGACACCAAGGAAATCGTCGCGGTGCTCAAGGAGCGCTTCCCGGACATCGACGGCCCGCACAAGGAAGACATCTGCTACGCCACCACCAACCGTCAGCTTGCGGTGAAGAAGGTCGCGCCGCAGGTCGAAGCCATGATCGTGGTCGGCTCGCCGAATTCGTCGAACTCGCAGCGCCTGCGCGAAGTCGCCGAGCGCGAAGGCTGCAAGGTCTCCGTGCTGGTGCAGCGCGCGTCCGAACTCGACTGGTCGAAATTCGAAGGCATCAAGACCCTCGGCATCACGGCGGGTGCATCCGCGCCGGAAGTGATCGTCGAGGAAATCATGGATGCGTTCGCGGCCCATTATCGTCTGAAGGTGGAAACCGTGTCCGCCGCGATGGAAAACGAATTCTTCCCGCTGCCGCGCCCGCTTCGTAGCGAAGTTTCGGCGGCGGAGTGA
PROTEIN sequence
Length: 326
MTPEAQKPQLSVVLCSPRGFCAGVVRAIDTVERALKLYGAPVYVRHEIVHNRYVVESLREKGAIFVAELNEIPQTDAPVVFSAHGVPKSIPSEAEKRNFFTLDATCPLVTKVHREAAIHFKRGREILLIGHAGHPEVVGTLGQLPKDAVLLIETMEQARTFQPKDASKLAFVTQTTLSIDDTKEIVAVLKERFPDIDGPHKEDICYATTNRQLAVKKVAPQVEAMIVVGSPNSSNSQRLREVAEREGCKVSVLVQRASELDWSKFEGIKTLGITAGASAPEVIVEEIMDAFAAHYRLKVETVSAAMENEFFPLPRPLRSEVSAAE*