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SCNpilot_expt_1000_bf_scaffold_1472_18

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 17616..18065

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 149.0
  • Bit_score: 308
  • Evalue 6.00e-81
rnhA; ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 149.0
  • Bit_score: 282
  • Evalue 7.90e-74
Ribonuclease H n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0F4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 149.0
  • Bit_score: 308
  • Evalue 4.30e-81
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGAACGACGCAAAACTTCCGCATGTGACGATCTTCACGGACGGCGCCTGCTCCGGAAATCCGGGGCCGGGCGGCTGGGGCGCGATTTTGCGTTTCGGCGATGTCGAGAAGGAATTGAAGGGCGGCGAAAATCCGTCGACCAACAACCGGATGGAATTGATGGCCGCGATATCGGCGCTGGAAGCGCTGAAGCGGCCGGCGTCGGTCGATCTCACCACCGACAGCCAGTATGTCCGTCAGGGCATCACGAGTTGGATTCACAACTGGAAGCGCAACGGCTGGAAGACCGCCGACAAGAAGCCGGTGAAGAATGCCGATCTGTGGCAGCGGCTGGATGCGGCGCTGAAAGCGCATGATGTGCGCTGGCACTGGATCAAGGGCCATGCCGGTCACGCCGAGAACGAGCGCGCCGATCAACTGGCGCGCGATGGGCTGGCGGAGAACAGGTAG
PROTEIN sequence
Length: 150
VNDAKLPHVTIFTDGACSGNPGPGGWGAILRFGDVEKELKGGENPSTNNRMELMAAISALEALKRPASVDLTTDSQYVRQGITSWIHNWKRNGWKTADKKPVKNADLWQRLDAALKAHDVRWHWIKGHAGHAENERADQLARDGLAENR*