ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2474_18

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: comp(17141..18100)

Top 3 Functional Annotations

Value Algorithm Source
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 319.0
  • Bit_score: 573
  • Evalue 2.10e-160
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 319.0
  • Bit_score: 502
  • Evalue 7.90e-140
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P523_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 319.0
  • Bit_score: 573
  • Evalue 1.50e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
TTGACCCAGTTGCAGCTCCGCACCCGCCGCGCCAAGCGCGCGCTCGCCGCGCGCGGCATGGTAGAAGCGGTGACATGGTCGTTCGTCTCGAAAGCGCAGGCCGAACTGTTCGGCGGCGGACAGGCCGATCTCGCACTCGCCAATCCAATCGCGGCCGATCTGTCCGACATGCGGCCCTCGCTGATCGCGGGCCTTGTGGCGGCGGCACAGGCCAATGCGGATCGCGGCTTCCCGGACGTCGCGCTGTTCGAGGTCGGACAGGTGTTCAAGGGCGACAAGCCCGAGCAACAGTTCATGGCGGCGAGCGGCGTGCGCCGCGCGCTGGCGTCGAGCAAAGGCACCGGCCGCTTCTGGTCGGGTTCGGCAAGCGTCGATGCGCTCGACGCCAAGGCCGATGCGCTGGCGGTGCTGGCCGCCGCAGGCGCGCCGATGCAGGGGCTGCAGATCGCAAGCGCCAAGGACTCGAAAAACTTCCCGGTCTGGCTGCATCCCGGCCGCTCCGGCGCGATCCAGATCGGCCCGCAGAACGTGCTCGGCTATTTCGGCGAACTGCATCCGCGTGCGCTTGAAGCGCTGAAGGCCGATGGGCCGCTGGTGGCGTTCGAGATCATTCTGGAGCGGATTCCCGACGCCAAGGCGAAGCCGACCCGCGCCAAGCCGCTGCTCGACCTGTCGCCGTTCCAGCCGGTGTCGCGCGACTTCGCGTTCATCGTCGATCGCGCGGTGAAGGCGGGCGACATCGTCCGCACCGCGCAGGCGGTGGACAAGAAGCTGATCACCGGCGTGACGGTATTCGACGTTTATGAGGGCAAGGGCATCGACGACGACAAGAAGTCCGTCGCCATCGCCGTCACCCTGCAGCCGCGCGAGAAGACGCTGACCGATCAGGAGATCGACGCGGTCGCGGCGAAGATCGTCGCCGATGTGACGAAGAAGACCGGCGGCGTGTTGCGGGGGTAA
PROTEIN sequence
Length: 320
LTQLQLRTRRAKRALAARGMVEAVTWSFVSKAQAELFGGGQADLALANPIAADLSDMRPSLIAGLVAAAQANADRGFPDVALFEVGQVFKGDKPEQQFMAASGVRRALASSKGTGRFWSGSASVDALDAKADALAVLAAAGAPMQGLQIASAKDSKNFPVWLHPGRSGAIQIGPQNVLGYFGELHPRALEALKADGPLVAFEIILERIPDAKAKPTRAKPLLDLSPFQPVSRDFAFIVDRAVKAGDIVRTAQAVDKKLITGVTVFDVYEGKGIDDDKKSVAIAVTLQPREKTLTDQEIDAVAAKIVADVTKKTGGVLRG*