ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6391_12

Organism: SCNPILOT_EXPT_1000_BF_Afipia_62_8

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 2 ASCG 11 / 38
Location: 10184..11305

Top 3 Functional Annotations

Value Algorithm Source
Agglutination protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN01_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 348.0
  • Bit_score: 585
  • Evalue 4.50e-164
  • rbh
Agglutination protein {ECO:0000313|EMBL:EGP07504.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 348.0
  • Bit_score: 585
  • Evalue 6.30e-164
type I secretion outer membrane protein, TolC; K12543 outer membrane protein LapE similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 329.0
  • Bit_score: 432
  • Evalue 1.20e-118
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGCGTACATTGGCGTTTGCCGCTTCGACGCTTGTGCTCACCTGTTCCCTGGCACACGCTCAGTCAGCATTTTTGATCAACGATGCCCTCAAACAGGCGATGGCGACCAACCCCGGGGTTGGCGAAGCTGCAGCGAACCGTCGCGCAACTGAGTCCGAATTGAGGCAGCAGCAGTCGACCCTGCTTCCGCAGGTGCGCGTCGAAGGGCGAGTCGGGCCCGAGAAGTTCAACCAGCAGATTGTCCCCGCTCCCTTGGGTAACGACGCCTGGAGAAATGGCCGCGATGTCTCCGTGGTCGGACGCCAGTTAATTTTCGATGGCCTCACCTCGCTGAACGAAATCTGGCGACAGTCGGCGCGCGTGAGTGCGGCCGCCGCCCGCGTTCACGAAAGAACCGAACTTTTGGCGCTGGACGCAGCGGAAGCCTACATCGATGTGATCCGTTATCAGCGGCTGATTTCGATCGCCGAAGACAACGTCAGGGTTCATCGCTCGCTGTTCGGCAACGTGCAGGCCCGCTTCAAGGGCGGACGCGCTGGCGAAGGCGATCTTGAACAGACACGTGAGCGTGTCGAAAGCGCGGTCGCCGCCCTCGCCGGCTTCCGTCAGAATCTCGATGAGGCGCGCGCCAAGTATCGCAAGACCGTCGGTCTCGAACCCTTCAACCTGCGGAACCCCAGCCGCCTCGGCGGGCTGCCTGCATCGAAGGATGAATCGCTCGCGGTCGCGATCAAGTTCAATCCGACGATCAAGGCCGCCGAGGCCGATGCCCGCGCCGCCAAGTACGCTTATCGCAGCACATCCGGCGCGTTCGTGCCGAACGTCTATCTCGAGGGGCGTGCTTCGACCGGCATTGACGCGAACGGCTATGTCGGCAAGCGCGACGACCTCAGCGGCAAGGTTGTGGTGAGCTGGGATGTCTTCCGTGGCGGTCAGGATACCTGGCGCCGCAATGAAATGGCGGAACGCTATGTCGAAGGCACCATGCGTCATNNNNNNNNNNNNNNNNTCCATCGACAAGGCTTGGGCCGCCCGGACACTGACCGCCGATCGTATCGCGGCGCTCAATCGTCAGATCGCTTCGGATCGCAAGGTCATCACGTCCTATCAGAAAGAATATGA
PROTEIN sequence
Length: 374
MRTLAFAASTLVLTCSLAHAQSAFLINDALKQAMATNPGVGEAAANRRATESELRQQQSTLLPQVRVEGRVGPEKFNQQIVPAPLGNDAWRNGRDVSVVGRQLIFDGLTSLNEIWRQSARVSAAAARVHERTELLALDAAEAYIDVIRYQRLISIAEDNVRVHRSLFGNVQARFKGGRAGEGDLEQTRERVESAVAALAGFRQNLDEARAKYRKTVGLEPFNLRNPSRLGGLPASKDESLAVAIKFNPTIKAAEADARAAKYAYRSTSGAFVPNVYLEGRASTGIDANGYVGKRDDLSGKVVVSWDVFRGGQDTWRRNEMAERYVEGTMRHXXXXXXHRQGLGRPDTDRRSYRGAQSSDRFGSQGHHVLSERI*