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SCNpilot_expt_1000_bf_scaffold_7505_1

Organism: SCNPILOT_EXPT_1000_BF_Acidovorax_65_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 100..1467

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcription regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUY1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 459.0
  • Bit_score: 840
  • Evalue 9.50e-241
  • rbh
sigma-54 dependent transcription regulator similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 459.0
  • Bit_score: 840
  • Evalue 3.00e-241
  • rbh
Sigma-54 dependent transcription regulator {ECO:0000313|EMBL:AFU44547.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 459.0
  • Bit_score: 840
  • Evalue 1.30e-240

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Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGTCCCGTCTCCCCGCGCCGCCTGCCGAACTGGTGTCCTTTCTGGAGGGCCTGACCGATCCACACATCCTGCTGGACGACCGCTATCGCATCCTGGCGGCCAATGGGGCCTATCGCCGCCAGTTCGGTGCAGCCGGCGGAGCGTACGGAAGCGTGGTGGGGTGCACCTGCCATGCCGTGTCCCACCACGCCAGCGTGCCCTGTGACCAGGCGGGCGAGTCCTGCCCGCTGGCGCAGGCGCGCGCCTCGGGGCAACGCGAACGCGTGCTGCATGTGCACCATACCGCCCAGGGCGAGGAATATGTGCAGATCGAGCTGGTGCCCGTGGTGGGTGCGGACGGCACCACAGGGTTCTTTGTCGAAAAGATGGTGCCTTTGCCGGTGGCGGCGCAGCCGGTGCCGTCGGCGCAGGGGCTCATCGGGCGTTCGCTAGCGTTCCAGAAGATGCTGGGGCTGGTGGCGCGGGTGGCGCCCTCGCGGGCTGCGGTGTTGTTGCTGGGCGAGTCGGGCACGGGCAAGGAGCTGGTGGCCCATGCTGTGCACCAGGGCAGCCTGCGCGCCCGGCGTGCGCTGGTGCCCGTGGACTGCTCCAGCCTGCCCGAGGCATTGTTCGAGTCCGAGCTGTTCGGGCATGAGAAAGGGGCGTTCACCGGCGCGGCCCAGGCCCGGCCGGGGTTGGTGGAGGCGGCCGACGGCGGCACGCTGTTTCTGGATGAGGTGGGCGACATCCCCCTGCCGCTGCAGGTCAAGCTGCTGCGCCTGCTGGAGACAGGCACCTACCGCCGCGTGGGCAGCACCGAGCTGCGGCATGCTGACCTGCGCGTGGTGTCCGCCACCCACCGTAACCTGCAGCACATGGTGGCCGCAGGGCGTTTTCGTGAAGACTTGTACTACCGCCTGAGCACTTTTCCCATCCACCTGCCACCGCTGCGCGAACGCCAGGGCGATACCGCCCTGCTGGCACGCGCGCTGCTGGAGCGTGTGGCACCCCCGCCCCGGGCGCTGCAGCTGTCTGGCGCTGCGCTGGCCTTGCTGGAGGCGCAGCCTTACCCCGGCAATGTGCGGGAGCTGCGCAACCTGCTGGAGCGCACCGCCTTGCTGTGTGATGGCGACACCATCGGCGCGGAGCATGTGCAGCAAGCGCTTGCCTGCGGCCTGCCGCCGCTCGCGGGAGCGGTGGGGGAGGGCGCAGTGGAGCCGCGTGCATCGGCGGCGTTGGCCGGGTCGTCACGTCAGCGGCGCTTGCTGGACGACCAGGCCCTGCAACAGGCTTTGGCAGCCCACCAGGGCAGCCGTGCGGCGCTGGCGCGGCAGCTGGGCATCAGCGAGCGGTCTCTGTACCGGCGGCTGAAAGACTCGGGCGTTTGA
PROTEIN sequence
Length: 456
MSRLPAPPAELVSFLEGLTDPHILLDDRYRILAANGAYRRQFGAAGGAYGSVVGCTCHAVSHHASVPCDQAGESCPLAQARASGQRERVLHVHHTAQGEEYVQIELVPVVGADGTTGFFVEKMVPLPVAAQPVPSAQGLIGRSLAFQKMLGLVARVAPSRAAVLLLGESGTGKELVAHAVHQGSLRARRALVPVDCSSLPEALFESELFGHEKGAFTGAAQARPGLVEAADGGTLFLDEVGDIPLPLQVKLLRLLETGTYRRVGSTELRHADLRVVSATHRNLQHMVAAGRFREDLYYRLSTFPIHLPPLRERQGDTALLARALLERVAPPPRALQLSGAALALLEAQPYPGNVRELRNLLERTALLCDGDTIGAEHVQQALACGLPPLAGAVGEGAVEPRASAALAGSSRQRRLLDDQALQQALAAHQGSRAALARQLGISERSLYRRLKDSGV*