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SCNpilot_expt_1000_bf_scaffold_8386_1

Organism: SCNPILOT_EXPT_1000_BF_Acidovorax_65_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(3..341)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 113.0
  • Bit_score: 183
  • Evalue 2.20e-43
aroK; shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 113.0
  • Bit_score: 172
  • Evalue 6.60e-41
Shikimate kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T730_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 113.0
  • Bit_score: 183
  • Evalue 1.60e-43

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCAGATTCGCTGCGCACTGGTCGGCATGCCCGGCTCGGGCAAATCCACCGTCGGACGCCAACTGGCGCAGCGACTCAAGGTTCCCTTCGTGGACCTGGACCAGCGGCTCGAGGAGTCCCTGGGCACCAGCATCCGCGCCTTCTTTGCCGCCGAGGGCGAGGAGCGCTTCCGCGCGCTGGAAGCCGAGATGCTCGCCCAGGTGGCGCAGGAGGACGGCGGCATGGTGCTCTCCACCGGCGGCGGTACCGTGCTGCGCCCCGAGAACCGCGCCGCGCTGCGCCGCCTCGGCACGGTGCTGTACCTGCGCGCCTCGCCCGACGACCTCTTCCGCCGCCTC
PROTEIN sequence
Length: 113
MQIRCALVGMPGSGKSTVGRQLAQRLKVPFVDLDQRLEESLGTSIRAFFAAEGEERFRALEAEMLAQVAQEDGGMVLSTGGGTVLRPENRAALRRLGTVLYLRASPDDLFRRL