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SCNpilot_expt_1000_bf_scaffold_3030_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(3..530)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUQ9_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 170.0
  • Bit_score: 115
  • Evalue 4.80e-23
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 170.0
  • Bit_score: 115
  • Evalue 1.50e-23
TPR repeat-containing protein {ECO:0000313|EMBL:ABS63642.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 170.0
  • Bit_score: 115
  • Evalue 6.70e-23

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGTCGAAGCCCGGACGGGGGCGCCGCTCAGCGGCGTCTTGGCTTGTGTTGGCTTTACTGATGTTGGCCGTCGCCAATGGGGGCTTGCTGCCAGTCTGGGGCCAGTCGTCGGATGTTCCGCAAGGCTCGTCGAGCGAGGAGCGCGCCCGCGCGCTCGATGCGCTTTTCAAAGGTCTGAAGGCCGCGCGCGGGGACGACGAGGCGGACGCAGTGGTCGCGCGCATCTGGGAGGTGTGGATGCGTTCCGGGCGCGCCGACGTCGACAGGCTCATGGAGGAAGGCATCGGCTATCTTTCCGTGCGCCAGCTCGGGGCGGCCCATGATCGCTTTTCCGAGGCCATCGAGGCCGCACCCGGCTTTGCCGAAGCCTGGAACAGGCGGGCGACGGTGCTCTTCCTCATGAGCGAGCAAGAGCAGTCGCTGTCGGACATCGAAAAGGTCCTGGCCCTCGAGCCGCGCCACTTCGGCGCGCTCGCCGGCCGCGGCATGATCCACGCCCAGGCGGGGCGCTGGAAGGAGGCACTGGAC
PROTEIN sequence
Length: 176
MSKPGRGRRSAASWLVLALLMLAVANGGLLPVWGQSSDVPQGSSSEERARALDALFKGLKAARGDDEADAVVARIWEVWMRSGRADVDRLMEEGIGYLSVRQLGAAHDRFSEAIEAAPGFAEAWNRRATVLFLMSEQEQSLSDIEKVLALEPRHFGALAGRGMIHAQAGRWKEALD