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SCNpilot_expt_1000_bf_scaffold_3030_9

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(5204..6487)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EFD78D similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 422.0
  • Bit_score: 587
  • Evalue 1.00e-164
Uncharacterized protein {ECO:0000313|EMBL:ESY78925.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 422.0
  • Bit_score: 587
  • Evalue 1.90e-164
putative ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 422.0
  • Bit_score: 586
  • Evalue 7.30e-165

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Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
GTGACGGACACTCGCTGGATCAACGCCGTTCTGACGTCCGCGCGTCCCCGCGTGGTTGCGGCGCTGCTCCGCCATTTCCGCGATCTCGACATGGCCGAGGAGGCTTGCCAGGAGGCTTGCCTCAGGGCACTGCGCCTGTGGCCGACCCAGGGCCCGCCGCGCGATGCTGCGGCTTGGCTCATCATGGTCGGCCGCAATGCCGCGATCGATGCAACGCGGCGCCAGCGCCGCCTGCAGCCGCTCCCCGAGGAAGACGCGATCTCGGATCTCTCGGACAGCGAGACGCCGACGATCGAGCGCCTCGATGCATCCGACTACCGCGACGACATCCTGCGTCTTCTGTTCGTGTGCTGCCATCCCGAGCTGCCGGCGACGCAGCAGATCGCACTCGCGCTGCGGATCGTATCGGGTTTGTCGGTCGCCCAGATCGCGCGCGCCTTCCTCGTGACCGATGCGGCCATGGAGCAGCGTATCACGCGCGCGAAGCGGCGGATCGGCGGTGCCAACGTGCCCTTCGAGGCGCCGGGAGCGGTCGAACGCAGCGAGCGGATCGCCGCCGTGGCCGGCGTGCTCTACCTGCTCTTCAACGAGGGCTACACGAATGACGTGGCCGAGCAGGGCGCGCGTGCCGTGCTCTGCGAGGAGGCCATCCGCCTCGGACGCCTGCTGCTTCATCTATTCCCGGTCGAGCCCGAGATCATGGCGCTTCTGGCCTTGCTGCTCCTGCAGCACGCGCGTGCCGATGCCCGCTTCGACGATGACGGAAACACCGTGCTGCTCCCGAACCAGGATCGCAGCCGCTGGAACTCCAGTCTGATCGCTGAAGGTCTCGCGCTCGTCGACAAGGCGTTCCGCCATCGCCGGCCCGGTCCGTATCAAGTGCAGGCAGCCATTGCGGCGCTCCACGCGCGTGCTGCACGCGCCGAGGACACCGATTGGGCGCAGATTGCGCTACTCTACGGCGCACTCGAGCAGATGCAGCCATCGCCCGTCGTGACGCTCAACCGGGCTGTTGCCGTCTCGAAAGCCGAGGGGCCGGAAGCTGCACTCGCCATGATCGAGCCGCTTGCCGGCCAACTCGACGGCTATTTCTACTTCCACGGTGCGCGGGGCGCATTCCTGCTCGAACTCGAGCGGATGCAGGAGGCCAAGGTCGCCTTCGATCGTGCCATCGCGCTCGCCAATACGCCGGCGGAGGCCGCGCACATACGCCTCCAGCTCGACAAGCTCGCAGGTGCGGCACGAGCTGGCGGAAAAAAGAAGGTGCCTGAGAAAAATTCTTGA
PROTEIN sequence
Length: 428
VTDTRWINAVLTSARPRVVAALLRHFRDLDMAEEACQEACLRALRLWPTQGPPRDAAAWLIMVGRNAAIDATRRQRRLQPLPEEDAISDLSDSETPTIERLDASDYRDDILRLLFVCCHPELPATQQIALALRIVSGLSVAQIARAFLVTDAAMEQRITRAKRRIGGANVPFEAPGAVERSERIAAVAGVLYLLFNEGYTNDVAEQGARAVLCEEAIRLGRLLLHLFPVEPEIMALLALLLLQHARADARFDDDGNTVLLPNQDRSRWNSSLIAEGLALVDKAFRHRRPGPYQVQAAIAALHARAARAEDTDWAQIALLYGALEQMQPSPVVTLNRAVAVSKAEGPEAALAMIEPLAGQLDGYFYFHGARGAFLLELERMQEAKVAFDRAIALANTPAEAAHIRLQLDKLAGAARAGGKKKVPEKNS*