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SCNpilot_expt_1000_bf_scaffold_4105_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(421..1311)

Top 3 Functional Annotations

Value Algorithm Source
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 288.0
  • Bit_score: 314
  • Evalue 1.30e-82
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 288.0
  • Bit_score: 310
  • Evalue 5.40e-82
Lipid-A-disaccharide synthase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I8C2_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 288.0
  • Bit_score: 310
  • Evalue 1.70e-81

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAGTGTGCCGCCGGCCCGACCGCTGCGCATATTCCTCGTCGCCGGCGAGCACTCGGGTGACGCACTCGGTGCCCGCCTCATGATGGCGCTCACGGCACAGCGGCCGGGGATCTCCTTCAGCGGCGTCGGCGGGCCCCGCATGACGGGGGCAGGGCTCAACTCGCTCTTTCCCATGAGCGACATCGCCGTCATCGGCCCGGCGGCCATCATCGAGCATCTGCCGCACCTTCTCCGCCGCATTCGCGAGACGGCGCAGGCGGCCATCGAGGCTTCACCCGACGTCGTCGTGATCATCGACGCACCCGAGTGGCCTGATCTGCCGATCGTCAACTACGTCTCGCCGAGCGTGTGGGCATGGCGCTCGTGGCGTGCGGCGCGGATGCGCGCTTACGTCGATGAGGTGCTGGCGCTGCTGCCCTTCGAACCGGATGTCCATGCGCGGCTCGGCGGGCCACCGTGCACGTATGTCGGCCATCCGCTCATCGAGCGCCGCCACTGGATCAATGCGCTCGATCCGCAAGGTCTCAGGGAACGCCTCGGCCTCTCGGTTGCGCGGCCATTGCTGCTGGTGCTGCCGGGAAGTCGCCGCAGCGAGCTCGCGCGACTCTGGGGGCCGTTCACGGCCACGCTGGAGGCGCTTCGCGCGACGGGCCATCGCCTCGATGTGATCGTGCCGACGGTCGAGAACGTGCGCGAGATCGTCGAGGAGCGCGTGAAGCACTGGCCCTTTCCGACGCACGTCATCGAGGACGAGGCGGACAAGTTCCGCGCTTTCAAGCTTGCAAGCGCCGCGCTGGCGGCCTCGGGTACGGTGACGCTCGAGCTGGCGCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCTCTTCCGCCGGCTCGTGA
PROTEIN sequence
Length: 297
MSVPPARPLRIFLVAGEHSGDALGARLMMALTAQRPGISFSGVGGPRMTGAGLNSLFPMSDIAVIGPAAIIEHLPHLLRRIRETAQAAIEASPDVVVIIDAPEWPDLPIVNYVSPSVWAWRSWRAARMRAYVDEVLALLPFEPDVHARLGGPPCTYVGHPLIERRHWINALDPQGLRERLGLSVARPLLLVLPGSRRSELARLWGPFTATLEALRATGHRLDVIVPTVENVREIVEERVKHWPFPTHVIEDEADKFRAFKLASAALAASGTVTLELALXXXXXXXXXXXXFSSAGS*