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SCNpilot_expt_1000_bf_scaffold_4277_13

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(10503..11561)

Top 3 Functional Annotations

Value Algorithm Source
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 337.0
  • Bit_score: 384
  • Evalue 2.70e-104
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 337.0
  • Bit_score: 384
  • Evalue 1.20e-103
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000362F336 similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 347.0
  • Bit_score: 402
  • Evalue 3.90e-109
  • rbh

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
TTGGCGAGCGAAGTGGGGCGTGCGGCGGGCTCGCGTCGCCCGCTGGCGCTGACGATGGGCGATCCGGCCGGCATCGGCCTCGACATCACGCTTCTCGCCTGGCGTGACCGGGCCAAGAACGCTCTTCCTCCCTTCGTACTTTATGCCGATCCGACGTCCGTCGCCGAGCGCGCCCGCACGCTCGGCCTTGCCGTTGATCTTGCCGTTTCCGAGGATATCGGGGCTGGGCGCGACGCGTTCGCCGCTCGTCTGCCGGTGCGACCGGTGCCGCTCGCGGTCCCGGTCGTCGCCGGGCGCACGGAGATGCTCAATGCCGGCGGCATCATCGCGGCGATCGATTTCGCCGTTGCCGATGCGGTTGCCGGCCGCGCCTCTGCCGTCGCGACGAACCCCATAGCCAAGAGCACGCTGCTGCGTGCCGGCTTCCATCACCCGGGCCACACCGAGTATCTCGCGGAGCTCGCCGGCCGCCATCATCCGGGCAAACGCTGGGTGCCGGTGATGATGCTCGCGTCGGAAATTCTTCGCGTGGTGCCGCTGACGGTTCACGTGCCGATCGCGCGCGTTCCGGGGCTGTTGAGCGTCGAGCGCATCAACGAGACGGTTCGCATCGTGGCCGATGCCATGGCCTCGGATTTCGGCATTGCCAAGCCGCGCATCGCCGTGACGGGCCTCAATCCGCACGCGGGCGAAGAGGGCACGATCGGTCGTGAAGAAGTGAACGTGATCGAGCCGGCGCTTGCCGCACTGCGCGCCGAGGGCCTGGCCGTCACGGGCCCGCATTCGGCGGACTCGCTCTTTCATGGCGACGCGCGCAAGCGCTATGACGCCGTCGTCACGATGTACCACGACCAGGCGCTGATCCCGATCAAGACGCTGTCGTTCGAGTCGGCGGTGAACGTCACGCTGGGCCTTCCGTTCGTGCGGACCTCGCCCGATCATGGCACGGCCTTCGACATTGCGGGGACGGGCACAGCCTCGCCGTCGAGTCTTGTTGCGGCGCTAAAGCTCGCTGCGGACCTGGCCGAGCGCCGCGCTGCGGCTCAGCGCCATGCCTGA
PROTEIN sequence
Length: 353
LASEVGRAAGSRRPLALTMGDPAGIGLDITLLAWRDRAKNALPPFVLYADPTSVAERARTLGLAVDLAVSEDIGAGRDAFAARLPVRPVPLAVPVVAGRTEMLNAGGIIAAIDFAVADAVAGRASAVATNPIAKSTLLRAGFHHPGHTEYLAELAGRHHPGKRWVPVMMLASEILRVVPLTVHVPIARVPGLLSVERINETVRIVADAMASDFGIAKPRIAVTGLNPHAGEEGTIGREEVNVIEPALAALRAEGLAVTGPHSADSLFHGDARKRYDAVVTMYHDQALIPIKTLSFESAVNVTLGLPFVRTSPDHGTAFDIAGTGTASPSSLVAALKLAADLAERRAAAQRHA*