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SCNpilot_expt_1000_bf_scaffold_3753_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 4476..5714

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 417.0
  • Bit_score: 725
  • Evalue 3.30e-206
tryptophan synthase subunit beta (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 407.0
  • Bit_score: 688
  • Evalue 1.70e-195
  • rbh
Tryptophan synthase subunit beta n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGW3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 417.0
  • Bit_score: 725
  • Evalue 2.40e-206
  • rbh

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGCCATCCCCGACCAAATCCGAGCCTCAGGCCCCCAACAGCTTCCGTGCCGGGCCTGACGATCACGGCTTCTTCGGTCTCTACGGCGGGCGCTTCGTCGCCGAAACGCTCATGCCGCTCATCCTCGAGCTCGAAAAGGCTTACGAGGCAGCAAAGAACGATCCGGCCTTCCAGGCCGAGCTGCGGGATCTCCTGGAGCACTACGGCGGCCGGCCGAGCCCGCTCTACTACGCCGAGCGCCTGACCGAGCACCTCAAGGGCGCCAAGATCTACTTCAAGCGCGACGAGCTCAATCACACGGGCAGCCACAAGATCAACAACTGCCTCGGCCAGATCCAGCTCGCGCGCCGCATGGGCAAGACGCGCATTATCGCAGAGACCGGTGCCGGCCAGCACGGAGTCGCGGTCGCGACCGTATGCGCGCGCTTCGGCCTGCCGTGCGAGATCTACATGGGTGCGACGGACGTCGCCCGTCAGTCGCCGAACGTCGCGCGCATGCACATGCTCGGCGCCAAGGTGAATTCGGTGACGGCGGGTGCGGGCACGCTCAAGGACTCCATGAACGAGGCCCTGCGTGACTGGGTGACCAACGTCCGCGACACCTACTACATCATCGGCACAGCGGCGGGCCCGCATCCCTATCCGGCCATGGTGCGCGACTTCCAGGCCGTGATCGGCAACGAAGTGCGAAAGCAGATGCTCGAGCGCGAAGGCCGGCTCCCCGACACGCTCGTCGCGGCGATCGGCGGCGGCTCGAACGCGATCGGCCTCTTCCATCCCTTCCTCGATGACAAGTCGGTCAAGATCTTCGGCGTCGAGGCGGCCGGCCACGGCATCGATGTTCCGAACGGGCACAACGCATCGATGAATGGCGGCCGGCCCGGCGTTCTGCACGGCAATCGCACGTATCTCATCCAGGACGAGGACGGCCAGATCCTCGAAGGTCATTCGATCTCGGCAGGCCTGGACTATCCGGGTGTCGGCCCCGAGCACTCATGGCTCAAGGATACGGGCCGTGTGAGCTATGTCCCGATCACCGACACCGAAGCGCTCGCAGCTTTCCAGCTCTGCGCCAAGCTCGAAGGCATCATTCCCGCGCTCGAGCCCTCGCACGCGCTCGCCTACGTGATGAAGCTCGCGCCGACACTGCCGGAGGACGATCTCCTCGTCATGAACATGTGCGGGCGCGGCGACAAGGACGTGTTTGCGGTCGCCGGCTATCTCGGGATGAAAATCTGA
PROTEIN sequence
Length: 413
MPSPTKSEPQAPNSFRAGPDDHGFFGLYGGRFVAETLMPLILELEKAYEAAKNDPAFQAELRDLLEHYGGRPSPLYYAERLTEHLKGAKIYFKRDELNHTGSHKINNCLGQIQLARRMGKTRIIAETGAGQHGVAVATVCARFGLPCEIYMGATDVARQSPNVARMHMLGAKVNSVTAGAGTLKDSMNEALRDWVTNVRDTYYIIGTAAGPHPYPAMVRDFQAVIGNEVRKQMLEREGRLPDTLVAAIGGGSNAIGLFHPFLDDKSVKIFGVEAAGHGIDVPNGHNASMNGGRPGVLHGNRTYLIQDEDGQILEGHSISAGLDYPGVGPEHSWLKDTGRVSYVPITDTEALAAFQLCAKLEGIIPALEPSHALAYVMKLAPTLPEDDLLVMNMCGRGDKDVFAVAGYLGMKI*