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SCNpilot_expt_1000_bf_scaffold_5659_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(4085..5269)

Top 3 Functional Annotations

Value Algorithm Source
LytTR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002F1AD24 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 401.0
  • Bit_score: 340
  • Evalue 2.00e-90
  • rbh
Bradyrhizobium elkanii strain UASWS1015 Contig149, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53167.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 401.0
  • Bit_score: 339
  • Evalue 8.30e-90
coxC; carbon monoxide dehydrogenase operon C protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 419.0
  • Bit_score: 336
  • Evalue 1.20e-89
  • rbh

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
GTGATCGTCACCCACGAACCTTGGATCGTGGCCCTCTCCATTCTGGTTGCCATCCAGGGCGCCTATGTCGGCCTGAGCCTCACGCAAGAGCTGCCAAACAGCGCCGGAGGCCGGAGACGATTGCTGCTCGCCGGCGCTGCAATAACGCTCGCGGTGGCAATCTGGTCGATGCATTTCGTGGGCATGCTCGCGGTCCAGTCGCCGGTCCGTATCGACTACCTCGTCCTCCCGACGCTCATTTCCTTCTTCGTCTGCGTCTTTGTCGTCGGACTTGCCGTCTTCGTCGCTTCGAGTGCGCCGCACTCTCTTGCGATCCTGGCCGTCTCCGCGACGGTCATGGGCGTTGGCATCGTCACCATGCACTTCATCGGCATGCAAGCCCTGCACGCGAACGCCATGGTCCACCATGACCCGATGTACGTCGTGGGCAGCTTTCTCATCGGTGTGATCGTCTCTGGCCTCGCCATCTACTTCACGTTCGTCGGGCCGCTGCGGCCACCGCTCGTTGCCGCATCGATCGCGCTCGGCGTGGCGATTTCGGGGATGCACTACACCGCCATGGCCGGAATGATGCTCCATCCCCTGCCGACACACGTTGCTGCCGAAGGAACGGCGGTTTCGCGCGATCTTCTGGCAGTGATCGTCGCCATCGTCGCGTTCGCCAGCTCGTTGGCATTCCTGATGGCACTCGTGCCGGATAGCGTTCCCGACAGCACGCGCAGTGCCGACAGGCACGCACCGGCCGATATGAACGCATCGTTCGTTTCCGGCGCGGCATTGCAACCCGCAATGGCAGGTTCATCGGCGCATATCCCGAGTTCGGCGGATCATCGGGCTGCGACAGGTCCGGCCATGGTTCTGCCCATACAGAAGGAAGGCGCGACCCACTATTTGCCCGTCGGCCGTATCTATGCGGTCAAGGCCGAGGCGCACTACACCACGATCTTCGATGGCACCGATCAGCTCTTCTGCAATCTCTCGATCAGTGAGGTCGAGGCGCGACTCAGCCAAAGCCGATACGTTCGCGTGCACCGCAGCCACATTGTTGCGGTCGAGCACGTGCAATCCATGAAGAAGTCGGGCGATGGCGCAGTCGCCCATCTCGACTCGGTGACGCCGTATACTGTCCCGATTAGCCGTCGGCGCATTGCCGAGCTGAAGGCATTGCTCGACGCCCGCACGTAG
PROTEIN sequence
Length: 395
VIVTHEPWIVALSILVAIQGAYVGLSLTQELPNSAGGRRRLLLAGAAITLAVAIWSMHFVGMLAVQSPVRIDYLVLPTLISFFVCVFVVGLAVFVASSAPHSLAILAVSATVMGVGIVTMHFIGMQALHANAMVHHDPMYVVGSFLIGVIVSGLAIYFTFVGPLRPPLVAASIALGVAISGMHYTAMAGMMLHPLPTHVAAEGTAVSRDLLAVIVAIVAFASSLAFLMALVPDSVPDSTRSADRHAPADMNASFVSGAALQPAMAGSSAHIPSSADHRAATGPAMVLPIQKEGATHYLPVGRIYAVKAEAHYTTIFDGTDQLFCNLSISEVEARLSQSRYVRVHRSHIVAVEHVQSMKKSGDGAVAHLDSVTPYTVPISRRRIAELKALLDART*