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SCNpilot_expt_1000_bf_scaffold_6431_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 659..1267

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J984_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 205.0
  • Bit_score: 225
  • Evalue 4.90e-56
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 205.0
  • Bit_score: 225
  • Evalue 1.50e-56
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCB67400.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 205.0
  • Bit_score: 225
  • Evalue 6.90e-56

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCCAAGCTCAGTCCAGAAACCCTACGGGAACGCAGCGACCATATCCTCGACGCTGCGGGGCGCTGCTTCGCGCGCGCCGGCTTCCACCGCACCACCATGCAGGACATCTGCCGGGAGGCCGAGGTCAGCCCCGGCGCCCTCTACATTTACTTCAACAGCAAGGAAGCCCTCATCGCCGGCATTTGCGAGCGCGAGCGCGCGGAGTTCGCGAGCCGCTTCGCCGAGATGCCCGTGGGGGCCGACTTCATGGGCGCGCTCGCCGCTCTCGGCCGGCAATTCCTCGAGGACCCGCTCCATCGCCGCCTTCTCTGCGTCGAGGTCGGCATCGAGGCCACTCGCAATCCCAAAGTCGGTGAGATCCAGAAGTCGGTCGAAGGCTTCATCCGCAGCTCCTTCCACGACCTCTTCACCAAGTTGAAGACCGAAGGCCGCATCGCCCCCGTCTTCGACATCGACACCGTCGTAGAGGCTTTCATGACGATCGCGGACGGAATGCTCTGGCGCCGCGCCGTCGATGAGAATTTCAAAGCTGATGTCGTCCTGCCTCCGCTCTTGGAGGCGGTCGCGGCGCTTCTCCGTCCCGTAGCCGACGAGGCCAAACCATGA
PROTEIN sequence
Length: 203
MAKLSPETLRERSDHILDAAGRCFARAGFHRTTMQDICREAEVSPGALYIYFNSKEALIAGICERERAEFASRFAEMPVGADFMGALAALGRQFLEDPLHRRLLCVEVGIEATRNPKVGEIQKSVEGFIRSSFHDLFTKLKTEGRIAPVFDIDTVVEAFMTIADGMLWRRAVDENFKADVVLPPLLEAVAALLRPVADEAKP*