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SCNpilot_expt_1000_bf_scaffold_6489_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 2894..5026

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type transport system, fused permease component n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K6V0_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 717.0
  • Bit_score: 638
  • Evalue 1.10e-179
  • rbh
TRAP-type transport system, fused permease component {ECO:0000313|EMBL:EKX56180.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 717.0
  • Bit_score: 638
  • Evalue 1.60e-179
TRAP transporter, 4TM/12TM fusion protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 705.0
  • Bit_score: 631
  • Evalue 2.50e-178
  • rbh

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Taxonomy

Rhodobacter sp. AKP1 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2133
GTGAGTACGAATCTGAAAGATACAGACCTCGAGGTGAAAGCTCCCGTTGCGGATGAGGAGTTCATCGGCACCCGGCGTGTTCTGCGAAGCTGGGAGGCGCAGTTCGTCGCTGCTCTCTGCATCACTTTCACGCTTTTCCATCTCTTCGTGCTCAACGTCTATTCCCTCGAGCCGCTGCTCTTTCGCGCCGTCCACGTTGGTTGGGGCCTGGCGATCGGCTTCCTCATCTCGGCGCCGTTCCTGCGCGCCGGCGCTGACGGCATTCCCTGGTACGACTGGATCCTCGCCGCCGCTTCGGCCGCCTGCGCCTTCTACATCTGGTGGGAGCTCGACGGCCTTCTGTTCCGTGCCGGCGCACAGTTCACGCCCGGTGATGTGATCACAGGCGTTGTCGGCACGCTCCTCGTCCTCGAAATCTCGCGCCGCATGACCGGCCTTGCGCTGCCGATCATCGCCGGCGTCTTCATCATCTACTGCTTCGTCGGCCCCTGGATGCCGGGCGTGCTGCGCCACAACGGCTTCGCCATCGATCGCTTCTTCACGTACATCTACAGCGAGTACGGCATCTTCGGCGTCACCACGCAGGTCTCCTCGACCTACATCATTCTGTTCGTGACGTTTGCCGCTTTCCTGCAAGTCTCGAAGGCCGGCGATTACATCAACGACGCGAGCAATGCGCTGTTCGGCTGGGCGCGCGGCGGACCCGCCAAGGCGTGCGTGGCGTCCGGCGTCGCGTTCGGCGCCATCTCGGGCTCGGCTGTCGCCAACGTCGTTGCCTCGGGCATGGTGACGATCCCCATGATGCGCAAGGTCGGCTATGACCGGCCGACGGCTGCCGCCATCGAGGCAACGTCATCGACAGGTGGACAGATCACGCCGCCGGTGCTCGGCGCCGGTGCGTTCCTCATGGCCGAGATCACCGGCATTCCCTATACGACCATCGCAGTCGCGGCGATCATCCCCTGCCTTCTCTTCTACATCGCTTGCTGGATCCACGTGGACCTCCACGCGATCCGTCTCGGCGTGCGCGGCCTCCCCTTCTCCGAGCTGCCGCCGATCAAGGCGATCCTGCCGCGTATCTACCTGCTCGCGCCGATCTTCGTGCTCGTCTGGGTGCTGCTCGACGGCTACTCGCCCTTCCGCGCGGGCTCACTCGGTATCGTGGCGGCCCTCATCTGCGGTGCGATCGCCCTCTGGTTCAAGGACTTCAAAGCCGACGGCAGCGTCAGCACGGACGGCGCTGATACGTTTGCGGCAATGCTGTTCAGCGGCGTCGTGCGCTTCGTCGTCTTGGCCGGTCTCGGCTTTGGAATGGCGGCGCTCATGCTGCACGTCCTGCCGGCGCTGCCGCAGTCCGTTTCGCTTGCCGCTTCGATTGCTCTCGTGGCCGTGCCGGCACTGCTGTTCGGCTGGCGGCGTTCGCTCGAGGCGCTCGAGAAGGCGGCGCGTGACAGCATCCAGCTCGTCGCGGTGTGTGCCTGTGCCGGCATCATCGTCGGTGTTGTCGCGCTGACTGGTGTTGGCGGCCGTTTCTCCGAGCTCATTCTGACGGTCGCCGGGGCCAATCAACTCCTTGCCATGGTCTTCGCGGCCATGGTTGCGCTCGTCCTCGGCATGGGCATGCCGACGACGGCTGCGTACGCGATCGCTGCTGCGGTCATTGCGCCCGGCCTTTCGCGCATGGGCGTGCAGCCGCTGGTCGCCCACATGTTCGTCTTCTACTTCGCGGTGATCTCGGCGATCACACCGCCCGTCGCGCTCGCGTCCTTTGCTGCCGCCGGCATGGCACAGGCAGATCCATGGAAGACGTCGTGGATCGCGGTGAAGTTTGGCCTCGCCACGTTCCTCGTGCCCTTCATGTTCTACTACTCGCCCGTCCTGCTCATGCAGGGAGAATGGCCGGCCATCGCACAGGCCGTCGTCACGGCGGCCATCGGCGTGTGGTTCCTGGCGGGCGCATCCGAAGGGTGGTTCGGCGGGCGGCTCGCCATGCCGCTGAGGCTCGCCATGGCTGTCGCCGCTCTTTGCATGCTGCACCCGGGCTCGTTCTCGGATCTGCTCGGTCTCGGTATCGGCGTGCCGATCTACGCTTACCAGCGCATGCGCGGGGGTGGCACGGCGCAGGCGGCCTGA
PROTEIN sequence
Length: 711
VSTNLKDTDLEVKAPVADEEFIGTRRVLRSWEAQFVAALCITFTLFHLFVLNVYSLEPLLFRAVHVGWGLAIGFLISAPFLRAGADGIPWYDWILAAASAACAFYIWWELDGLLFRAGAQFTPGDVITGVVGTLLVLEISRRMTGLALPIIAGVFIIYCFVGPWMPGVLRHNGFAIDRFFTYIYSEYGIFGVTTQVSSTYIILFVTFAAFLQVSKAGDYINDASNALFGWARGGPAKACVASGVAFGAISGSAVANVVASGMVTIPMMRKVGYDRPTAAAIEATSSTGGQITPPVLGAGAFLMAEITGIPYTTIAVAAIIPCLLFYIACWIHVDLHAIRLGVRGLPFSELPPIKAILPRIYLLAPIFVLVWVLLDGYSPFRAGSLGIVAALICGAIALWFKDFKADGSVSTDGADTFAAMLFSGVVRFVVLAGLGFGMAALMLHVLPALPQSVSLAASIALVAVPALLFGWRRSLEALEKAARDSIQLVAVCACAGIIVGVVALTGVGGRFSELILTVAGANQLLAMVFAAMVALVLGMGMPTTAAYAIAAAVIAPGLSRMGVQPLVAHMFVFYFAVISAITPPVALASFAAAGMAQADPWKTSWIAVKFGLATFLVPFMFYYSPVLLMQGEWPAIAQAVVTAAIGVWFLAGASEGWFGGRLAMPLRLAMAVAALCMLHPGSFSDLLGLGIGVPIYAYQRMRGGGTAQAA*