ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7565_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(4590..5009)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal-body rod protein FlgC n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HD9_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 137.0
  • Bit_score: 174
  • Evalue 6.90e-41
flgC; flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 137.0
  • Bit_score: 174
  • Evalue 2.20e-41
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 137.0
  • Bit_score: 174
  • Evalue 9.60e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGCCGACGAGCTCAAAGCCGCGATCATCTCCTCTGCATCGGGCCTTCGCGCTCAGTCGACGCGCATTCGCATCGTTTCGGAGAACCTCGCCAACGCCAGCGCGACGGCGACCGTGCCCGGCGGCGACCCTTACGCGCGAAAGACGATCAGCTTCGCGCAGGAGCTCGACCGCGCCAACGGCGTCAACACCGTCCGCGTGAATTCGATCGGCCGCGACCCGGCGCCTTATCCGGCTCAGCACATGCCGGGGCATCCGGCGGCCGACTCGAAGGGGTACGTGAAGCTCGCCAACGTCAATCCGCTGGTCGAGCTTTCGGACATGCGCGAGGCGCACCGCTCTTATGAAGCCAACCTGCAGATGGTGCGTCAGGCCCGCGAGATGATCGGCGACCTGATCGACCTGTTGAAAGGCAAGTGA
PROTEIN sequence
Length: 140
MADELKAAIISSASGLRAQSTRIRIVSENLANASATATVPGGDPYARKTISFAQELDRANGVNTVRVNSIGRDPAPYPAQHMPGHPAADSKGYVKLANVNPLVELSDMREAHRSYEANLQMVRQAREMIGDLIDLLKGK*