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SCNpilot_expt_1000_bf_scaffold_7666_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 5951..7168

Top 3 Functional Annotations

Value Algorithm Source
glucose-methanol-choline family oxidoreductase; K03333 cholesterol oxidase [EC:1.1.3.6] similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 404.0
  • Bit_score: 338
  • Evalue 3.30e-90
GMC oxidoreductase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9W9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 402.0
  • Bit_score: 564
  • Evalue 1.20e-157
  • rbh
GMC oxidoreductase {ECO:0000313|EMBL:AHB47247.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 402.0
  • Bit_score: 564
  • Evalue 1.60e-157

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
TTGCGCCCTGCCCGCGATCCGCAAGCTACGACGCTCACCAAGTACAAGGCGCTGGAGGCCGCAGGCACCGCCCTCGGCGTATCGCCCATCGCCCCCGAGGTCGTCGTCGGCTTTGCCGATACGGTCAATCCGGCCGGCATCGCACAGTTCGCCTGCACGCGCTGCGGCGACTGCTGCGCCGGTTGCAATGTCGGCGCCAAGAACACGGTCGCGCTGACCTACCTCCCCGAGGCCGTGCGCCACGGCGCCGAGCTCTTCACCCATGGTCGCGTGACGCATGTCGTGCCGGCGTCCGGCGGCGGCTGGCGCGTGTATATCGAGCGCGTCGATACGCCGGCGGCCGGTAACAGCCAGCATCTATCGCTGGCCGCCGACATGGTGATCCTCGCCGCCGGGACGCTCGGCTCGACGGAGATCCTGCTGCGCTCACGCGCCAGAGGCCTCGCGCTCTCCGACCGCCTCGGCGAGCGCTTCTCCGCCAACGGCGACATCATCGCCTTCGGCTATGGCGCCAAGGTGCCTGTCAACGCGATCGGCGTCGGCCATCCCGCGAAGGTCGATGGATTGAGCGTCGGCGCGTCCGTCTCCGGCCAGCTCGAGATCGTCGATCCCGACAACCTCGCGAACTCGGTGACCATCCAGGAAGGCGCGATGCCCTCCGCGCTCGCACCCGTCCTGCCGGTCATGTTCGTGCCGAACGGCCGCCTGCTCGGTGCGCTGCAGAGCCTCGTCAGCGGCGTCTACAAGGGCCCCTTCGCGAGCCTGCAGACCTTCTTCGCCGTCTCCCATGACAGCGCAGCCGGCCGCTTCCGCCTCGATGGTGACCGCCTCGCGCTCTCCTGGCCCAATGCCAAGGACGAGGCCGTCTATCAGCGCCTCGATGCGGCCCTCGCCGCGCTCGTCGGCAGGGTTGGCGGCAGCTACGTCAAGAATCCGCTCGCCGGCAGCGTCATGGGCAACCAGCCCGCGACCGCGCATCCGCTCGGCGGCTGCGCCATGAGCGCGGATCGCACCTCGGGCGTGGTCGATCATGCCGGTCGCGTCTTCGACGCGGCGCCCGGCAAAGATACGAGCGCCGTGCACGCGGGGCTTCACGTCATCGACGGCGCGATCATTCCGCGCTCGCTCGGCGTGAACCCGCTGCTGACCATCACCGCGCTCGCCGAACGCGCCATGCTCCACGTCGCCCGCGAGCACGCTCTCGCTTGCGGGGACTGA
PROTEIN sequence
Length: 406
LRPARDPQATTLTKYKALEAAGTALGVSPIAPEVVVGFADTVNPAGIAQFACTRCGDCCAGCNVGAKNTVALTYLPEAVRHGAELFTHGRVTHVVPASGGGWRVYIERVDTPAAGNSQHLSLAADMVILAAGTLGSTEILLRSRARGLALSDRLGERFSANGDIIAFGYGAKVPVNAIGVGHPAKVDGLSVGASVSGQLEIVDPDNLANSVTIQEGAMPSALAPVLPVMFVPNGRLLGALQSLVSGVYKGPFASLQTFFAVSHDSAAGRFRLDGDRLALSWPNAKDEAVYQRLDAALAALVGRVGGSYVKNPLAGSVMGNQPATAHPLGGCAMSADRTSGVVDHAGRVFDAAPGKDTSAVHAGLHVIDGAIIPRSLGVNPLLTITALAERAMLHVAREHALACGD*