ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9699_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 372..968

Top 3 Functional Annotations

Value Algorithm Source
Putative TRAP-type transporter small integral membrane subunit, possible TauL-like sulfonate transporter n=1 Tax=Rhizobium sp. RepID=L0NN65_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 161.0
  • Bit_score: 178
  • Evalue 5.20e-42
Putative TRAP-type transporter small integral membrane subunit, possible TauL-like sulfonate transporter {ECO:0000313|EMBL:CCF22266.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 161.0
  • Bit_score: 178
  • Evalue 7.30e-42
tripartite ATP-independent periplasmic transporter DctQ similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 152.0
  • Bit_score: 99
  • Evalue 1.60e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. NT-26 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGTCTCGCGCGGCTACATGTGTTCGCCCGCGCGAGCGCTTGTCTCATCGGCGGTACAGACTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTACTCAAATGGCTCGATAATTGGTTCGAGCAAGCCGTTCTTGTCGCGCTTTGCACAATTCTCGTGGCCTGCCTATCGTACTCGGCGGTCGTGCGCTACTTCCTCAGTCACCCGGTTCTGACAGGCCTCTCGCACAAGGCCGAGGAGCTGGCGATCTTCGCCTTCGTATTTCAGCTCTATTTCGGCGCCGTACTGGCAACGAAAGAACGCGCGCATTTCCGAGTCTCCGCTCAGCTCGACTGGTTGCGGCCGCCGTTTCGGCGATGGCGTTTTGTCATCGGCGACGTGATCTGGCTTGGTTTCAATCTTTTCGTCGTTTGGCAGGGGATCGTGCTCATCGGCAGTGCGCTCGAGAGGCCCGAGCCCTCAATGGCGCTCCAGATCCCCATGCAATGGATCTACATGGTCATCCCGTTGACGTTCGCGCTCACATGTTTCCGCCTTGTTCAGACCTACATGAGGCCGGAGCCCGAGGATGACGATCCCATGAAGAAGCAGCTGTGA
PROTEIN sequence
Length: 199
VSRAATCVRPRERLSHRRYRLXXXXXXXXXXLLKWLDNWFEQAVLVALCTILVACLSYSAVVRYFLSHPVLTGLSHKAEELAIFAFVFQLYFGAVLATKERAHFRVSAQLDWLRPPFRRWRFVIGDVIWLGFNLFVVWQGIVLIGSALERPEPSMALQIPMQWIYMVIPLTFALTCFRLVQTYMRPEPEDDDPMKKQL*