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SCNpilot_expt_1000_bf_scaffold_15051_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(2720..3301)

Top 3 Functional Annotations

Value Algorithm Source
Capsule polysaccharide export protein-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EP2_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 193.0
  • Bit_score: 159
  • Evalue 4.10e-36
RkpR, polysaccharide export protein {ECO:0000313|EMBL:EWY38918.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 191.0
  • Bit_score: 160
  • Evalue 3.40e-36
capsule polysaccharide export protein; K10107 capsular polysaccharide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 193.0
  • Bit_score: 159
  • Evalue 1.30e-36

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGCCGAGCAGGAGCTCGCGCAATCGGAAGCGCGCCTGCGCCTTGCCCGCCTCGCCGTCAGAACCTTCCGCGAGGAGCGCCAGGAGATCGACCCGCGCAAGAAGGCGGAGGCGCGCCAGCAGATCATCGAGACCCTGCAGGGCGAGCTTACGAGTGCGCGTGCGCGCCTGCAGACCATGCGCCAGCAGCTCGCCGAGAACGCGCCGACCGTCGTCTATCAGCGCAGTGTCATCAAGGCCCTCGAGAAGCAGATCGACGAGGAGCGCAGCCGCGCCGCGACCTCAGCGACCGCCGCCGACGATTCGACCATCGGCGGCCTGATCGCCGACTACGAGGCGCTCACCATCGATCGCGAGTTCGCCGAGAAGGCGTACGTCTCGGCCATGGGCTCGCTCGAGCGCGTGCGCTTCGATGCCGCCCGCCAACAGCGCTACCTCGCGACCATCGTCGCGCCGTCCTTGCCGCAGCACCCCCTCTATCCCAAGAGCCTGCTCAACACGCTGATCGTGCTCGTCGGGCTCTTCTGCATCTGGGGCCTTGCCGTGCTGATCGGCCTCGCCGTGCGCGATCACATAGCCTGA
PROTEIN sequence
Length: 194
MAEQELAQSEARLRLARLAVRTFREERQEIDPRKKAEARQQIIETLQGELTSARARLQTMRQQLAENAPTVVYQRSVIKALEKQIDEERSRAATSATAADDSTIGGLIADYEALTIDREFAEKAYVSAMGSLERVRFDAARQQRYLATIVAPSLPQHPLYPKSLLNTLIVLVGLFCIWGLAVLIGLAVRDHIA*