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SCNpilot_expt_1000_bf_scaffold_15051_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(5364..5909)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035CFD9C similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 164.0
  • Bit_score: 158
  • Evalue 8.70e-36
polysaccharide export protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 162.0
  • Bit_score: 150
  • Evalue 4.30e-34
Polysaccharide export protein {ECO:0000313|EMBL:ADH89055.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 162.0
  • Bit_score: 150
  • Evalue 1.90e-33

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
CGCCATCCCGCGCGCGAGGTGTACGTGACCTTCGTGCGCGGCCAGGAGCGCGGCACGCAACTCCTCGAGAAGATCATCGACGACCAGAGCGAGAACATCTTCATCCTGGCCGGCGACCGCATCTACATCAACCACGACCCCAAGCGCTATACGGTCTTCGGTGCGGTTCACAAACCGGGCGCCTACGTGTTTCCCGCCTCGCAGGTCAATGTTCTCGAAGCCATGGCGCTCGCCGGCGGGCTCCTCGACGAGCGCGCCGATGCGACGGGCATCTTCATCTTCCGCTACGAGAACGCGGCCATTATTCGCGCCATCCAGCCCGATGCCCCACAGTTCGGCGGTACGGGCACCGTCCCCACCGTCTACCGCCTCAGCCTGCGTGATCCGGGCAGCTACTTCTACGCCCGCGGCTTTCTGCTCCGTGACAAGGACGTCGTCTACATCGCCAATGCCCCCGGCGTCGAGATTGCCAAGGTCCTCCGGCTGCTCGATCTCGGCACGCGCTCTTTCGGCAATCTCCGTGGCAATGTCCGCGCCTTCGACTGA
PROTEIN sequence
Length: 182
RHPAREVYVTFVRGQERGTQLLEKIIDDQSENIFILAGDRIYINHDPKRYTVFGAVHKPGAYVFPASQVNVLEAMALAGGLLDERADATGIFIFRYENAAIIRAIQPDAPQFGGTGTVPTVYRLSLRDPGSYFYARGFLLRDKDVVYIANAPGVEIAKVLRLLDLGTRSFGNLRGNVRAFD*