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SCNpilot_expt_1000_bf_scaffold_26751_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(1022..1588)

Top 3 Functional Annotations

Value Algorithm Source
Prephenate dehydratase {ECO:0000313|EMBL:AHB47928.1}; EC=4.2.1.51 {ECO:0000313|EMBL:AHB47928.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 187.0
  • Bit_score: 256
  • Evalue 2.60e-65
prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51] similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 180.0
  • Bit_score: 255
  • Evalue 1.00e-65
prephenate dehydratase n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036CED10 similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 177.0
  • Bit_score: 257
  • Evalue 1.10e-65

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGCACGCCCTCGGGCAGTGCCGCCGGATCATTCGCGAGCATGGCCTCAAGGCGCATATTGCCGGCGATACAGCCGGTGCCGCCCGCCAGGTCGCGGAATGGGGCGAGCGTTCACGCGCCGCACTCGCGCCCCGCATTGCCGCCGAAATCTACGGTCTTGATATCCTCGCCGAGGACGTCGAGGACGAGAAGCACAACACGACGCGCTTCGTGATCCTCTCGAACGAGCCGGAGGACGCGGAGCCCGGCAATGGCCTGGTGATGACGACTTTCATCTTCAATGTGCGCAACGTGCCGGCGGCGCTCTACAAGGCCATGGGGGGGTTTGCCACGAACGGCGTGAACATGACCAAGCTCGAGTCCTACCAGGTGAACGGCGAGTTCGTGGCGACCATGTTCTATGCCGACATCGAGGGGCACCCAACCGATCGCCCCGTGCGTCTCGCACTCGAGGAGCTTTCGTTCTTCTCGACGGAGCTGCGCATTCTCGGCACGTATCCGGCGAGCCCGTACCGCATCGAGATCGCGCGCAAAGCGGCAGCACGCGCCGCAGTCAATCCGGGCTGA
PROTEIN sequence
Length: 189
VHALGQCRRIIREHGLKAHIAGDTAGAARQVAEWGERSRAALAPRIAAEIYGLDILAEDVEDEKHNTTRFVILSNEPEDAEPGNGLVMTTFIFNVRNVPAALYKAMGGFATNGVNMTKLESYQVNGEFVATMFYADIEGHPTDRPVRLALEELSFFSTELRILGTYPASPYRIEIARKAAARAAVNPG*