ggKbase home page

SCNpilot_cont_750_bf_scaffold_49_164

Organism: SCNPILOT_CONT_750_BF_Chloroflexi_54_27

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 211620..212228

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-W factor n=2 Tax=Paenibacillus RepID=F5LM43_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 188.0
  • Bit_score: 123
  • Evalue 2.00e-25
RNA polymerase sigma-W factor {ECO:0000313|EMBL:EGL16569.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 188.0
  • Bit_score: 123
  • Evalue 2.80e-25
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 197.0
  • Bit_score: 111
  • Evalue 2.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paenibacillus sp. HGF7 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCAATGTTTAGAGAAGACCAAAAACAGGATATTCCCCCTCCGCCAACCGGTGAAATTGAACTGGTCCAGTCCGCCTCAAAAGGCGAGTTCGAGTCGTTTGAAAAACTTGTCGAAATCTACCTGGATGGGCTCTGGCGATATGCCCTGCGCATCCTGGGTAACGAAGAAGACGCTAAAGACGCGGTCCAGCAGACCCTAATCCAGGCCCATCAATCAATTGCTGGTTTGCGACAACCTGAAAAGTTCCGCTCCTGGCTTTTTAAAATTAACCGCAATAAGTGTTTTGATATTTTAAGGAAAACAGGGGATAGGTCTGGCTCAGAAATAAGCCTGACCCAGGAGATGGATGCCGGTAGTTTAACCGACCTGACCAGTCACGCTCCTTTGCCGGGCGAAATCATTGAACGCCAGGAGACCCGCCAGGTAATCCGCCAGGGGATAAATGCTTTGCCGTCCAAACAGCGCCAGGTGGCGGCTATGCGCTATGCCACCGACCTGACTTTTCAAGAGATTGGAGAAGTGCTTGGCCTTAACGAAAATACGGTTAAAACCTTATTCCAACGGGCCAAAGCGGGGTTGCGGTTTTATTTGCGCAGACATCTTTAA
PROTEIN sequence
Length: 203
MAMFREDQKQDIPPPPTGEIELVQSASKGEFESFEKLVEIYLDGLWRYALRILGNEEDAKDAVQQTLIQAHQSIAGLRQPEKFRSWLFKINRNKCFDILRKTGDRSGSEISLTQEMDAGSLTDLTSHAPLPGEIIERQETRQVIRQGINALPSKQRQVAAMRYATDLTFQEIGEVLGLNENTVKTLFQRAKAGLRFYLRRHL*