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SCNpilot_cont_750_bf_scaffold_973_9

Organism: SCNPILOT_CONT_750_BF_Chloroflexi_54_27

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(9647..11047)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 469.0
  • Bit_score: 689
  • Evalue 3.00e-195
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 470.0
  • Bit_score: 362
  • Evalue 2.40e-97
  • rbh
RNA-splicing ligase RtcB n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MTG5_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 470.0
  • Bit_score: 362
  • Evalue 7.80e-97
  • rbh

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGAAGAGTAAACCAAATTTAGTCTATAACTGGAAAGATTACGCGGTTGCCAACCCGGAAGGCTATTTCGATTTGCAGACGCCGGATACGGGTGAGGTGCCAGTGCGGCTTTTCTTCACCCCGGCCCTGCTTGCGGAAGCCGAGGATGGCATTTACCAGCAAATCGTAAACGCGACTCGCTTCCCTGGCGTCAAAATGGTTGCCATTACCCCTGACGCCCACTTCGGCTATGGCGTGCCGGTCGGCAGTGTCATTATCACCGATGGGACTGTGGCGATGGGTCCCGTGGGGTACGATATAGGTTGCGGGATGATGAGCGCCCGGTCGGATGTATCGGTAGAAAAAGCTACACCTAAAAGGAGATTGGCTTTTAACAAGGCCGTGACCGAACGGGTAGCGATGGGGGCGGGTCATTCGAGCAAGTCGCGGGCCGGGCGAATTTCCGAGGGCGAGTTCGAAAAACTGGTGCGTGGTGGGGCCGATTACTATATCGGCAAGTACGGGGCGAGGATTGACCGGAGCCGGGCCGAACGAAACCGCATCCCGGTAGACGACGATTGGAAAATCCCCTGGGGCGGCAAGGGCCGGCCCGAACGGGGTCTGACACAGCTTGGCTCGTTGGGTGGCGGCAACCACTTTATCGAGTTACAGCGTTGCGAAGAAACCCAGACTCTTTTCGTACAGGTCCATACCGGTAGTCGCGGCTTCGGGCACGGACTGGCGACCAACTACTTTGAATTGGCCCGCCAGGAGAACCCGGCTACCGCGACCCATATCGACCTGGGCTATTTCACGCCCGACTCACCTCACCACCGGAGCTATCTGAACGCGGTCGCGGTGGGTGGTAACTTTGCCATAATCAACCGGCTGATCCTGTTCGAGCAGATTGCCGAAGCTTTCGAGGAAGTCTTTAACGCCGAGCTTGAACTGATTTATGAAATCAGCCATAACCTGGTCCAGCAGGAATGGCAGCCCGATTTTGGGAACGTCTGGGTTCACCGCAAAGGTGCGACCAGGGCTTTCCCGGCAGGACATCCCGGCCTGCGAAAGACTATCTGGGAGGAAACAGGCCACCCGGTCCTGATTCCGGGCAGCAACCGCGACTACAGCTATATTTTGCGACCCCTGGAAGGGTCGGCTAAAAGCGGCTTTTCGGTCAATCACGGGGCGGGACGCAGGCTCTCGCGGGGTGAAGCCAAACGCCGGTTGCAGCAGGAAAAGGTCAACAAGATTTACAAAGAAGCCGGAATTATCGTCAATATAAACGGGGATGTGCCGCTCGACGAGTCCGATGCTTGCTACAAATCTTCGGAAGAAGTGGTAAACGCGGTGGTCGGGGCCGGGCTGGCCGAAATCGAGTACCATTTGTGGCCGTTGGCTTCCCTGAAAGGGGTTGACTGA
PROTEIN sequence
Length: 467
MKSKPNLVYNWKDYAVANPEGYFDLQTPDTGEVPVRLFFTPALLAEAEDGIYQQIVNATRFPGVKMVAITPDAHFGYGVPVGSVIITDGTVAMGPVGYDIGCGMMSARSDVSVEKATPKRRLAFNKAVTERVAMGAGHSSKSRAGRISEGEFEKLVRGGADYYIGKYGARIDRSRAERNRIPVDDDWKIPWGGKGRPERGLTQLGSLGGGNHFIELQRCEETQTLFVQVHTGSRGFGHGLATNYFELARQENPATATHIDLGYFTPDSPHHRSYLNAVAVGGNFAIINRLILFEQIAEAFEEVFNAELELIYEISHNLVQQEWQPDFGNVWVHRKGATRAFPAGHPGLRKTIWEETGHPVLIPGSNRDYSYILRPLEGSAKSGFSVNHGAGRRLSRGEAKRRLQQEKVNKIYKEAGIIVNINGDVPLDESDACYKSSEEVVNAVVGAGLAEIEYHLWPLASLKGVD*