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SCNpilot_cont_750_bf_scaffold_265_20

Organism: SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21

near complete RP 49 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 18220..18783

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 187.0
  • Bit_score: 217
  • Evalue 1.20e-53
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 187.0
  • Bit_score: 217
  • Evalue 3.90e-54
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02828.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 187.0
  • Bit_score: 217
  • Evalue 1.70e-53

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGACCAGCTATCTGCACTCCTCCAACAGAAATGGTGATGAGCATGACCTGGAGACCCGCTTTGCGGACATCTTCCAGCAGCATGAGCACAGGCTGTATACCCTTGCGCTGTGCCTGGTCAAGTCCGAGCAGCATGTCAAGGACATCATTCAGGAGGTATTTCTGAAATTGTGGGAGCACCGGCATCACTTGCAGGATATTCACAATATGGAAGCCTGGCTGTACCGCGTAATGGAAAATAAGGTCATCGATTTTCTTCGCAAGGCGGCTGCAGACAGCCGGCTGAAAGACGCCATCTGGAATACCATCTCGCAGGCCCGCAATGACACCGACGAATGGCTGGCGGCAAAAGAGTATGACCGGATCATTCAGCAAGCCATCGATCATTTGCCTCCCCAGCGGCGCCGCATTTATTGTCTGCACAAGAAAGAAGGGCTCGATCATGCCCGGATAGCCGAGGAATTATCTATTTCCCGTCATACTGTCAAAAACCAGCTCTCCGCGGCTATCCAGTCAATCCGCAGCTTTGTCGCCCGCAATTCGGGGTTCTTCCTTTTTCTATAA
PROTEIN sequence
Length: 188
MTSYLHSSNRNGDEHDLETRFADIFQQHEHRLYTLALCLVKSEQHVKDIIQEVFLKLWEHRHHLQDIHNMEAWLYRVMENKVIDFLRKAAADSRLKDAIWNTISQARNDTDEWLAAKEYDRIIQQAIDHLPPQRRRIYCLHKKEGLDHARIAEELSISRHTVKNQLSAAIQSIRSFVARNSGFFLFL*