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SCNpilot_cont_750_bf_scaffold_1348_12

Organism: SCNPILOT_CONT_750_BF_Rhizobiales_64_62

partial RP 30 / 55 MC: 1 BSCG 31 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(12266..12616)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer signal peptidase TraF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 110.0
  • Bit_score: 221
  • Evalue 5.40e-55
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50289.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 110.0
  • Bit_score: 221
  • Evalue 7.50e-55
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 110.0
  • Bit_score: 200
  • Evalue 4.00e-49

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GTGCGCCGATCGGCTTCTGGCTATCTGCCCAAGGGCGTGCCGCTGATGAAGCGTATCCTCGCCGTGTCTGGGCAGACCGTTTGCCGCTCCAACCTCACCATCACGGTGGATGGCGTCGAGGTCGGTGCAGCGCTCGAACACGACCGTGCCGGTCGCGGTCTTCCCGTCTGGCAGGGCTGTCGCCGTGTCCAGACCGGCGAAGTCTTCCTCATGAACTGGCAGGTCCGCGACAGTCTCGACGGCCGCTACTTCGGCCTGATCTCGACCGACCAGATCATCGGTCGAGCCGTCCCGCTGTGGACCGACGAAGAGGGCGCCGGCCGCTTCGAATGGCGCGTGCCGACGCGCTGA
PROTEIN sequence
Length: 117
VRRSASGYLPKGVPLMKRILAVSGQTVCRSNLTITVDGVEVGAALEHDRAGRGLPVWQGCRRVQTGEVFLMNWQVRDSLDGRYFGLISTDQIIGRAVPLWTDEEGAGRFEWRVPTR*