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SCNpilot_cont_750_bf_scaffold_136_29

Organism: SCNPILOT_CONT_750_BF_Rhizobiales_64_37

near complete RP 48 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 11 / 38
Location: 27394..27633

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZH56_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 76.0
  • Bit_score: 72
  • Evalue 2.70e-10
helix-turn-helix motif similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 76.0
  • Bit_score: 72
  • Evalue 8.60e-11
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 74
  • Evalue 7.80e-11

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Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGCTCACGGCACAACAAGTCCGCGCTGCTCGGGCGCTTCTCGGGTGGAAACAGGAAGAACTTGCTCAAAAAGCGGGTATCGGTCTTGCCACGATTCAGCGCCTCGAACGCGGTTCGGGGCCTCTGATGGCTCATGTCTCGACGGCTGTGAAAATTGAAACCTGCCTCAAGGAGGCCGGCATTGAATTTATGGAAGCCGACGTTTCTGCGGGGGAAGGGGTCCGCTTCGCAAAGGTCTGA
PROTEIN sequence
Length: 80
MLTAQQVRAARALLGWKQEELAQKAGIGLATIQRLERGSGPLMAHVSTAVKIETCLKEAGIEFMEADVSAGEGVRFAKV*