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SCNpilot_cont_500_bf_scaffold_1096_11

Organism: SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(10088..10981)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI0003477401 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 295.0
  • Bit_score: 263
  • Evalue 3.10e-67
LysR family transcriptional regulator {ECO:0000313|EMBL:CQD23805.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 291.0
  • Bit_score: 271
  • Evalue 1.60e-69
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 295.0
  • Bit_score: 238
  • Evalue 2.60e-60

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Taxonomy

Mycobacterium lentiflavum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGAACGACGGTCAGCTCCGGGCGTTCGTGGCGGTTGCCGACAACCTGCACTTCGGCAAAGCCGCCGAACACCTGCGCCTGGCGCAGCCCTACCTGAGCCGCACGATCCGGTCGTTGGAGGACGAGATGGGTGCCGCGCTGTTCGCGCGCACCACTCGCCGGGTGGAGCTGACCGCCGCCGGCCGCGCGCTGCTCGACCCCGCCCACCGGATGCTGGCGCTGCAGCATGAGGCCCAGGCGCAGGTCACCGCGGCCGTCGAGGGGCGGAGCGGACGGGTCCGCATCGGATTCGCCGGGCCGTCGGCGCACGTCGCGGTGGGACGCCTGGCCAGGGCGGTGCGCGAGCAGTACCCGCTGGTGGATCTCGACCTGCGCCCGGGCACCTACGGCACCACGGCACTCGCGGACCTCGCGAGGGGCGACATCGACTTGGGCCTGGCGCGGTTCACCGGGACGCCTCCGGGTGTCGCGTCCCAGGTCGTCGAACCGGACCGGTGCGTATTCGCGGTGCCGGTCGGCCACCGCCTCGCGGACGCCGGGCGGATGCGTTTCGTCGACCTGCGCGACGAGCCTTTGGTCGCCTTCCCCGAGTCACACGGCTCCGCGGTCCGCGCGCTGCACGTCACGATGTGCGAGCAGGCGGGGTTCGCGCCACGGTTCGTCCAGGCGGCACCGGATTCGTGGACATGCATGGCGCTCGTCGCCGCGGGGGTCGGCCTGCACTTCACGACGGCGAGCGCCGTCGCGCAGCTGCCGCTCGACGGGGTGCGCATCGTCGAGGTGCAGGACACGATGGCGCCGATCGCCGTCCACCTCGTGTGGCGGTCCGACGACGACGGTCAAGTGCTCCACCGGGTCCTGGCCACCGCCACCGAGGTACTTCCGGGCACATGA
PROTEIN sequence
Length: 298
VNDGQLRAFVAVADNLHFGKAAEHLRLAQPYLSRTIRSLEDEMGAALFARTTRRVELTAAGRALLDPAHRMLALQHEAQAQVTAAVEGRSGRVRIGFAGPSAHVAVGRLARAVREQYPLVDLDLRPGTYGTTALADLARGDIDLGLARFTGTPPGVASQVVEPDRCVFAVPVGHRLADAGRMRFVDLRDEPLVAFPESHGSAVRALHVTMCEQAGFAPRFVQAAPDSWTCMALVAAGVGLHFTTASAVAQLPLDGVRIVEVQDTMAPIAVHLVWRSDDDGQVLHRVLATATEVLPGT*