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SCNpilot_cont_500_bf_scaffold_1403_1

Organism: SCNPILOT_CONT_500_BF_Sphingobacteriales_50_6

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 2..2206

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 735.0
  • Bit_score: 1231
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 735.0
  • Bit_score: 1203
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Segetibacter koreensis RepID=UPI0003677F0A similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 735.0
  • Bit_score: 1215
  • Evalue 0.0

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2205
GACATCTGGAGCCGTGTGGATACCCGCATCACGGAGACCCTGATCCATGAGCTGAGCTCGGACAAGCAGGGTTTCAACCCTGTGTATATGATGCTGGATTCGGGCGCCCGTGGTAGCAAGCAGCAGATCAAGCAGCTGGCTGGTATCAGGGGTCTGATGGCCAAGCCCAGGAAGTCCGGCAGCACGGGTAGCGAGATCATAGAGACCCCCATTCTGTCCAACTTCAAGGGTGGTCTGAACGTATTGGATTACTTCATCTCTACCCACGGTGCCCGTAAGGGTCTTGCGGATACGGCCTTGAAAACGGCTGATGCCGGCTACCTCACCCGTCGTCTGGTGGACGTGGCGCAGGATGTGGTCATTACGGAAGAGGATTGCGGCACCCTGCGTGGTATCGCCACTTCTGCCCTGAAGGACAATGAGGATATCGTAGAACCTTTATATGACAGGATACTTGGACGTACATCACTTCATGATGTATACGATCCTTCCAACGAAAAGCTGATCGTCAGTGCCGGTGAGCAAATTACAGAAGAGATCGGCAAGGCTACCGAAGATGCCGGCATCGAGACGGTGGAGATCCGTAGCGTGCTCACCTGCGAAAGCAAGCGTGGCGTCTGTATAAAATGTTATGGTAAGAACCTGGCGACAGGCTATACGGCCCAGAAGGGTGATGCGGTGGGTATCATTGCAGCCCAGTCCATCGGTGAACCTGGTACCCAGCTGACACTTCGTACTTTCCACGTGGGTGGTGTTGCCGGCAGCGCTTCGGTAGAATCCACTATGGCTGCGAAGTTCGAAGGAACGATACAATTCGATGGTCTGAGAACGGTGGTTGCTGAAAACAATGAAGGAGCCAAGGTGCAGGTTGTTATCGGCCGTACCGGTGAGGTTCGTATCATGGATGTGAAGAATGACCGTTTGCTGATCACCAACAACGTGCCTTATGGCGCTACGTTGAATGTGAAGGATGGGCAGAAGGTAGCCAAGGGCGAAGTGATTTATACTTGGGACCCTTTCAGCAACGTCGTAATTTCCGAGATCGGTGGAAATGCGAAGTTCGATGCCGCATTAGAAGGTATCACCTACCGTGAAGAGGCTGACGAACAGACCGGACACCGTGAGAAGGTGGTTATCGAAACAAAGGACAAGACGAAGATCCCTGCCATCAATATCGAGGGTAATAAGGAGATCAAGACATACAATCTGCCTGTAGGTTCGCATATCGTTGTGGAAGAAGGCGATGAAGTGAAGGCCGGCCAGGTAATCGTGAAGATACCCCGTGTACTGGGTAAGCTGCGCGATATCACCGGTGGTCTGCCCCGTGTAACGGAACTTTTCGAAGCGCGTAACCCGGGCAACCCGGCTATCGTGAGCGAGATCGACGGTGTGGTGACCTTTGGTAATATCAAACGTGGTAACCGTGAGATCATCGTAGAAGCCACGGACGGCGTAGTGAAGAAGTACCAGATACCTCTGACAAGGCAGATTCTCGCGCAGGACGGTGACTTTATCAAGGCCGGCGCTCAGTTGTCTGACGGACAGGTGGCACCTGCGGATATTCTCTCTATCAAGGGTCCCTTTGCTGTACAGGAATACGTTGTGAACGAAATCCAGGAAGTATATCGTCTACAGGGTGTGAAGATCAATGACAAGCACATCGAGGTCATCGTACGTCAGATGATGCGTAAGCTAACCATTGTCGACCCTGGCGATACACGATTCCTGGAAGAAGATACGGTAGACAAATTCGAGTTCCTGGAGGAAAATGACTGGATCTTCGATAAGAAGGTGATAAGTGACCCGGGTGAATCCGGCAAGCTGAAAGCCGGACAGATCGTAAGTCTCCGGGAGGTAAGGGAAGAGAACTCCATCCTTCGCCGGAATGACAAGAAACTGGCTGAATTCCGTGACGCCAGCGCGGCAACGTCTGCACCCCTGCTGCTGGGTATCACCAAGGCATCTTTGAGTACACAGAGCTGGATCTCGGCTGCCTCCTTCCAGGAAACCACAAAGGTATTGTCCTCAGCCGCCATTCAGGGCAAGACCGACAAAATGCTTGGCCTAAAAGAAAATGTGATCACAGGTAACCTGATCCCTGCCGGGACAGGTCAACGTGAATTCAACATTATTGTCGGAAGCAAAGAGGATTTTCAACTTTTACAGACAGCCCGAAATGAAATGCAACACAACTATGAAGACTAG
PROTEIN sequence
Length: 735
DIWSRVDTRITETLIHELSSDKQGFNPVYMMLDSGARGSKQQIKQLAGIRGLMAKPRKSGSTGSEIIETPILSNFKGGLNVLDYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVITEEDCGTLRGIATSALKDNEDIVEPLYDRILGRTSLHDVYDPSNEKLIVSAGEQITEEIGKATEDAGIETVEIRSVLTCESKRGVCIKCYGKNLATGYTAQKGDAVGIIAAQSIGEPGTQLTLRTFHVGGVAGSASVESTMAAKFEGTIQFDGLRTVVAENNEGAKVQVVIGRTGEVRIMDVKNDRLLITNNVPYGATLNVKDGQKVAKGEVIYTWDPFSNVVISEIGGNAKFDAALEGITYREEADEQTGHREKVVIETKDKTKIPAINIEGNKEIKTYNLPVGSHIVVEEGDEVKAGQVIVKIPRVLGKLRDITGGLPRVTELFEARNPGNPAIVSEIDGVVTFGNIKRGNREIIVEATDGVVKKYQIPLTRQILAQDGDFIKAGAQLSDGQVAPADILSIKGPFAVQEYVVNEIQEVYRLQGVKINDKHIEVIVRQMMRKLTIVDPGDTRFLEEDTVDKFEFLEENDWIFDKKVISDPGESGKLKAGQIVSLREVREENSILRRNDKKLAEFRDASAATSAPLLLGITKASLSTQSWISAASFQETTKVLSSAAIQGKTDKMLGLKENVITGNLIPAGTGQREFNIIVGSKEDFQLLQTARNEMQHNYED*