ggKbase home page

SCNpilot_cont_500_bf_scaffold_4802_6

Organism: SCNPILOT_CONT_500_BF_Sphingobacteriales_50_6

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 5029..6006

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 332.0
  • Bit_score: 204
  • Evalue 1.40e-49
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 332.0
  • Bit_score: 204
  • Evalue 4.50e-50
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00255.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 332.0
  • Bit_score: 204
  • Evalue 2.00e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 978
ATGGAGGAAAATGAACATATACGGCTGATAACAAGGCATCTCAGCCGGGAAACCTCCTCTGAAGAAGAGGCCAGTCTCCGGCAATGGCTGGAGGGCGACCCTGCGCATCGCCAGCAGTTCGATGCGCTCAGGAATGTCTGGGACACCAGCGGCGACGTCATCCGGGACATGCCATTCGATACCGCTGCCGCCTGGGAAAAGATCGCCCCTTCCCCGCCGCCTCCATCCGTACGCAGATCCCCGACCCCCCTGCGCCTCCTCTCGCCCCGGCTGGTTGCCGCAGCGTCTGTTCTTCTCGCCCTGTGTATAGCGGCAGGGTGGTATTACCTGACCCGTCAACATCCTCTGCAGCAGGTCATCGCCGCCGCCGACAATCAACAGCTGACCCTTCCGGATGGATCAAAGGTCTGGCTAAGAAAAGGCGCCGGATTGAAATACCAGGATCCCTTCAATAAAGGGTTACGTGAAGTGCAGCTCACCGGAGAAGCTTTCTTTCAGCCCATATCCGACCCCGCCCGGCCTTTCCGGATCAGGACCATCCATGGCGCCATCGAAGACATTGGCACCACCTTCCTCGTCAGGGACAGGGACAGCATGGATGAAGTATTTGTCATAACAGGCAAGGTAAAGCTCACCACCGGGGAGGACCCATCCCAATCACTTGTCCTATCATCCGGGCAAAAAGCAACGATCCTTAAAAATAAATTGTCTCCATCCGATTGGGGTACACCCAACATGATGTCATGGAAGACAGGCGCCCTGGAATTTCGACAGACGCCCCTGGACCAGGTAGTGCAGGATATAAACGATCACTTCGGGTCGCAGCTGAATATAGCCCCCGGCCTGGAAGTGGAAAAGATAAAGATCACTGCACGTTTTGATCACCAGCATCTCGACCAGGTACTGGATGAAATAAAGCTACTGACCGGCCTTCATATCATACGGATTAAAGATACCCTTCTCTTCGTCCGGCAATGA
PROTEIN sequence
Length: 326
MEENEHIRLITRHLSRETSSEEEASLRQWLEGDPAHRQQFDALRNVWDTSGDVIRDMPFDTAAAWEKIAPSPPPPSVRRSPTPLRLLSPRLVAAASVLLALCIAAGWYYLTRQHPLQQVIAAADNQQLTLPDGSKVWLRKGAGLKYQDPFNKGLREVQLTGEAFFQPISDPARPFRIRTIHGAIEDIGTTFLVRDRDSMDEVFVITGKVKLTTGEDPSQSLVLSSGQKATILKNKLSPSDWGTPNMMSWKTGALEFRQTPLDQVVQDINDHFGSQLNIAPGLEVEKIKITARFDHQHLDQVLDEIKLLTGLHIIRIKDTLLFVRQ*