ggKbase home page

SCNpilot_cont_500_bf_scaffold_6418_1

Organism: SCNPILOT_CONT_500_BF_Sphingobacteriales_50_6

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 3..974

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNP2_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 317.0
  • Bit_score: 292
  • Evalue 6.80e-76
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 317.0
  • Bit_score: 292
  • Evalue 2.10e-76
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACU64142.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 317.0
  • Bit_score: 292
  • Evalue 9.60e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 972
GGACGAGGGCAGCATAAGGAGCGTTCCGGCTGGTTGCATCGGCCATTGGTCCGGGTGGCCGCCCTGGCTGCCAGTCTGCTGGTCTGTGTCTGCATGATATGGTTGTTCCGGTCTCATCCTGCCGGTAAAAAGACGGGCGAGATGGTGGCTGTCAATGATATCAAACCCGGCGCCGATAAGGCGATCCTCACGCTGGCCAACGGCGAACAGATCATACTGGACAGCTCGCAGGATGGGAGCATTGCCCGGCAGGGGGCTACAACGGTGCTGAAATTCAATGGGGTTATCTCTTACTCCCAACATGCAGGTCCTGACAAAGGAGGTCAGGGGCCTGTGCTATACAATACCATCACTACACCCCGGGGCGGGCAATATGAGCTTGTGCTTCCCGATGGCAGCCGGGTCTGGCTGAATTCTGCGTCCTCACTTCGTTTTCCCACGGCCTTCACGGGGACAAAGCGTGAGGTGGAGCTGAAAGGGGAGGGGTATTTTGAGATAGAAAAGGACCGGGACAGGCCGTTTGCGGTGGCTGTCAACGACATGAAGGTTCAGGTGCTGGGCACTCGGTTCAATACCATGGCCTATCCTGATGAAAAGACGATCAATACCACGCTGCTGGATGGTTCCGTCGTTGTTACGGAGGGCAAACTGGAAAAGAAACTGGAGCCCGGACAGCAGGCCGCCTTCGACAGTGCGGGAGGCCGCCTATCCGTTAGCAAGGCTGATGTACAGCAGGTCATTGCATGGAAGACAGGGCTTTTTGAGTTTTCCAATACCGATCTGGCGGCTATCATGCGGCAACTGGCCCGGTGGTATGACATAGAGGTTGTCTATAAGGTGGCGCCGAACAAGATACCGCTGGGCGGAAGCATCAGCAGGAAGCTAAACCTGAAAGAAGTGCTTGACCTCCTGGAAGCCAATGGAATAAACCATTTTAAGATAGAAGGAAGAAAAGTATTTGTGCTGTCGTAA
PROTEIN sequence
Length: 324
GRGQHKERSGWLHRPLVRVAALAASLLVCVCMIWLFRSHPAGKKTGEMVAVNDIKPGADKAILTLANGEQIILDSSQDGSIARQGATTVLKFNGVISYSQHAGPDKGGQGPVLYNTITTPRGGQYELVLPDGSRVWLNSASSLRFPTAFTGTKREVELKGEGYFEIEKDRDRPFAVAVNDMKVQVLGTRFNTMAYPDEKTINTTLLDGSVVVTEGKLEKKLEPGQQAAFDSAGGRLSVSKADVQQVIAWKTGLFEFSNTDLAAIMRQLARWYDIEVVYKVAPNKIPLGGSISRKLNLKEVLDLLEANGINHFKIEGRKVFVLS*