ggKbase home page

SCNpilot_cont_500_bf_scaffold_26417_3

Organism: SCNPILOT_CONT_500_BF_Eukaryote_58_7

partial RP 11 / 55 MC: 1 BSCG 5 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 782..979

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase II elongator complex subunit n=1 Tax=Naegleria gruberi RepID=D2V4X0_NAEGR similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 55.0
  • Bit_score: 71
  • Evalue 5.00e-10
RNA polymerase II elongator complex subunit; K11373 elongator complex protein 1 similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 55.0
  • Bit_score: 71
  • Evalue 1.60e-10
Elongator complex protein 1 {ECO:0000256|PIRNR:PIRNR017233}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 55.0
  • Bit_score: 71
  • Evalue 7.10e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Naegleria gruberi → Naegleria → Schizopyrenida → Heterolobosea → Eukaryota

Sequences

DNA sequence
Length: 198
ATGGTGATGATGGTGATAGTCGAACGAGGAGCGATTCTAGTGTGTGTCGTACCACACGACATGAAAGTCATTCTCCAGCTACCTCGTGGTAACTTGGAAGTCATCTATCCACGTGCTTTGGTCTTGTCGCTCGTGCGTCAATTGCTCGACAAGTTTGAGGTTCGTTCTCTTGTCATTTCCACTGGCACGAGTTTGTGA
PROTEIN sequence
Length: 66
MVMMVIVERGAILVCVVPHDMKVILQLPRGNLEVIYPRALVLSLVRQLLDKFEVRSLVISTGTSL*