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SCNpilot_cont_500_bf_scaffold_63450_1

Organism: SCNPILOT_CONT_500_BF_Eukaryote_58_7

partial RP 11 / 55 MC: 1 BSCG 5 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 182..790

Top 3 Functional Annotations

Value Algorithm Source
Stackhouse genomic scaffold, scaffold_237 n=1 Tax=Chondrus crispus RepID=R7QCA6_CHOCR similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 189.0
  • Bit_score: 171
  • Evalue 6.50e-40
Stackhouse genomic scaffold, scaffold_237 {ECO:0000313|EMBL:CDF36137.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 189.0
  • Bit_score: 171
  • Evalue 9.10e-40
TrkA Cterminal domain containing protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 195.0
  • Bit_score: 167
  • Evalue 5.00e-39

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Taxonomy

Chondrus crispus → Chondrus → Gigartinales → Florideophyceae → Eukaryota

Sequences

DNA sequence
Length: 609
GTGCTCGGGCGCTACCGCCTCTGGCGCATGGTGTTCGTGTGCCTGATCGCTCTCGCCATGGTCGTCGTCTCGACCGTCGAGCTGATTGATCTCTTCTCGGCGGCGCTCGTCGCCACGTGCGTCTACATTCTCACCAAGTGCATCACCATGAACTCGGCGCTCGACTCAGTCAAGGGCGATCTGCTGCTCATCATTGCCGCGGCCTTCGGACTCGGCGTGGCGCTCGAGAAGACCGGCGCCGCCAAGGCGCTCGCCGACGTGCTGGTGAGCATCTTCTCGCCCGCCGGCAAGATCGGCGTCCTGTTCGGCCTGTACTTTGCGACCGCCGTCATGAGCTCGGTCATCAGCAACGCCGCCACCGTGACGCTCATGTTCCCCATCGGCTGGTCGTTCGTGCAATCGGGAGAGCTGACGCAAAAGGCCGTCATCTACACGCTGATGCTCGCGGGCTCGTGCTGCTTCTCGACGCCGATCGGCTACCAAACCAACATCATGGTCACGGGTCCCGGAGGCTACCAGCCGGTGGACTTTTTCAAGTTCGGTGGCCCGCTGACCATTCTCTCGACCATCGTCGGAGTGCTCTTGTGTTACTTTATCTTTCAATATTGA
PROTEIN sequence
Length: 203
VLGRYRLWRMVFVCLIALAMVVVSTVELIDLFSAALVATCVYILTKCITMNSALDSVKGDLLLIIAAAFGLGVALEKTGAAKALADVLVSIFSPAGKIGVLFGLYFATAVMSSVISNAATVTLMFPIGWSFVQSGELTQKAVIYTLMLAGSCCFSTPIGYQTNIMVTGPGGYQPVDFFKFGGPLTILSTIVGVLLCYFIFQY*