ggKbase home page

SCNpilot_cont_500_bf_scaffold_241_3

Organism: SCNPILOT_CONT_500_BF_Chloroflexi_54_19

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 2158..4512

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5L2_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 706.0
  • Bit_score: 211
  • Evalue 2.80e-51
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 705.0
  • Bit_score: 228
  • Evalue 5.40e-57
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABX04245.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.0
  • Coverage: 706.0
  • Bit_score: 211
  • Evalue 4.00e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herpetosiphon aurantiacus → Herpetosiphon → Herpetosiphonales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 2355
ATGAAAAGGCTCCGTAACGCGGAAGGGCGTTTCTTCTGGGCGCTGGCCGCCGCCGGAATTCTCATCGCCCTGGCCCTTATCGTGGGGTCGAATATACAGCGCAGCAACGCGGAAATTGTCCAATCCACTTATCGTACCTCCTATGTTACACGTGGCGAAATTGAGGAAGTGGTCAAAGCGCCCGGCCTGGTGACGGCCCGGACGGCTGATTTGACCTTCCAGGCCAGCGGCGTTATCAGCGATGTGCTGGTACGGCCCGGTCAGGTGGTCCAGGCTTCCCAGGTCTTGAGCCGGCTTGACTCCCGCGAGGCCGAAGCGCAGCTTTCGGCGGCCCAGGCCGGTCAGAAGGCGGCCCAGAATAACCTCGATTCCATCAAGTCCGGGGTGAACGCGCAGCTTGCCGATGCCCAGCAAAACCTAAAAATCGCCCAGGCCCGCCTGGCCCAGGTCCAGGGCGTGACCGGTACGCCCGATCAACTGGCTGCTGCCCAGCACGCCGTAGACGCGGCGGTTTACCGCTACAACGTCGTTGTTTCCAAAACCAACGTGCAGGATGTGAATTCGGCGAACGCGGCTTTGCGCCAGGCTCAGGCGAACCTGGCCCTTTTACAGACGCCCGCCTCCAAGGCTCAACTCGCCCAGGCCCAGGCCAGGGTTGACGCCGCCACTCAAAACCTGGAAAAGGTCAAAAGCGAACGCGCCAGCGCTGTCGAGCAGGCCCAGTTAGATGTAACCAAAGCCCAGAATGGGCTCGATGCCGCTAACGCCACCTATAACCAGATTCATAACGAACTCTATAACCCTGACGGAACCGTAAAAGATACCACCACCCAGGCTGACCTGGACCGCGAAACCGCCGCCAAGTTGGGGGTTGACCAGGCCAAGATAACCCTCGACGCCGCCCAGAAAGCCCTTACTGCCGCTACCGCGCTTCAGACTTCGGCGGTAAAAGAAGCCGAGGCGTTACAGATTGAAGCGCAGTCGGCCCTGGAGAATTTGCAGGATGGGCCGTCCCAACAGGCTATTTTGAGCGCCCAGGCCGCCGTGGATAAAGCCCAGGCCGATTATGACGCGGCGGTGGCCGGGGGTCCGACCCAGGATGAGATTGATGCAGCCCAGGCCGATATTGACCAGGCTAAAGCTGTCCTCGACGGTCTTAACAAAGGCGGCAACCCGGCGGATATCCAGGTTGCCCAGGCCGAGGTAGATAAATACCAGGCCCAGGTGAATACTCTTTCCAAGGGGGCGTCCGCTGCCGACCTGGCAAAGGCCCAGAGCGATTTGGACCAGGCCACCGCCCAGGTGAAGCAGGCCGAGCTTAAACTCGAACAACTCAATTTGCTGGCTCCCTTTAACAGCGTAGTCGAAAGCATCAATGTCGCCGCCGGTCAGGCCATTGCGCCCGGCCCGGTCGCGGTTACCCTGGTTGACCTCTCGAAACTTTCCTTTGAAGCCAGGGTTGGCGAGAGCAGTATCCAGCGGATTAAACTGGGCCAGTCGGTCCGGGTTTACTTTGAGGGTATCCAGGGCGTCCGGCAAGACCCTTTCCTCGGCAAGGTTAGCCTTATTTCTAGCAGTTTGAAAAACCCGACCGCCAGCGGCACCACCGAGGACAGCCGCAGCCTGAACGTCCCGACGCCGAATCCCCTGGCGACCCCTTCCGGCGACCAGAGTGGCTTCCCGGTTACGATTACCCTGGACCAGGATACCGAGCTTTCCAGTCTCAAACCAGGTATGACCGGGCGGGCCCGGTTCGTGCTGGGTAGCAAGCCCGATGCTTTGCTGGTGCCAAAAATCTCTGTAAGAAGCCTTGAGGTCGGTCCGGTGGTAGATGTGGTCTTGCCGGACGGCCTGATTGTAGCAACCCCGGTCACGGTTGGCTTAATTGGTGATGATTACGTTGAAGTGACCGACACCGGTCTATTGCGTGAAGGTGATAAGATAGTGCTGTACGGGACGGCCCCGGTACCACCTTTGCCTACAGCTACCGCCGATGCGGGCGCGCCTGCCGGGACGCCGGGTGCTGGCTCTACGCCAGGGGCTACCCCTGGGGTTGCTGGCAGCCCTAACGCCACCGCTCAGCCCGGTTCGACCCCTGCCCAGACGCCGATTGTGGTTTCGACTGTGACCCCTGCCGGTTCGCTGGCAGCCCAAACCAGTGTCGCCGCAACCACGGCTGCCGTGACGACGGTCCCGGCTGGCACGGGGACTACCGCCGCGTCTTCCGAGGGCCCACCACCCCCGCCGACCACTACCGTGTCTGTTACGACTGCCGTTTCGACCTCCCCGGCATCCTCCGCAGCCGCCGGGGCCGGGGTCTTTTCGAACAAACCTACCCCCACACCCAGGGGTTAA
PROTEIN sequence
Length: 785
MKRLRNAEGRFFWALAAAGILIALALIVGSNIQRSNAEIVQSTYRTSYVTRGEIEEVVKAPGLVTARTADLTFQASGVISDVLVRPGQVVQASQVLSRLDSREAEAQLSAAQAGQKAAQNNLDSIKSGVNAQLADAQQNLKIAQARLAQVQGVTGTPDQLAAAQHAVDAAVYRYNVVVSKTNVQDVNSANAALRQAQANLALLQTPASKAQLAQAQARVDAATQNLEKVKSERASAVEQAQLDVTKAQNGLDAANATYNQIHNELYNPDGTVKDTTTQADLDRETAAKLGVDQAKITLDAAQKALTAATALQTSAVKEAEALQIEAQSALENLQDGPSQQAILSAQAAVDKAQADYDAAVAGGPTQDEIDAAQADIDQAKAVLDGLNKGGNPADIQVAQAEVDKYQAQVNTLSKGASAADLAKAQSDLDQATAQVKQAELKLEQLNLLAPFNSVVESINVAAGQAIAPGPVAVTLVDLSKLSFEARVGESSIQRIKLGQSVRVYFEGIQGVRQDPFLGKVSLISSSLKNPTASGTTEDSRSLNVPTPNPLATPSGDQSGFPVTITLDQDTELSSLKPGMTGRARFVLGSKPDALLVPKISVRSLEVGPVVDVVLPDGLIVATPVTVGLIGDDYVEVTDTGLLREGDKIVLYGTAPVPPLPTATADAGAPAGTPGAGSTPGATPGVAGSPNATAQPGSTPAQTPIVVSTVTPAGSLAAQTSVAATTAAVTTVPAGTGTTAASSEGPPPPPTTTVSVTTAVSTSPASSAAAGAGVFSNKPTPTPRG*